Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0095

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
93,162	+		Echvi_0093	0.69	-0.8
93,163	-		Echvi_0093	0.69	-0.8
93,190	+		Echvi_0093	0.71	-1.3
93,218	+		Echvi_0093	0.74	-1.5
93,218	+		Echvi_0093	0.74	-0.6
93,218	+		Echvi_0093	0.74	-0.1
93,313	+		Echvi_0093	0.82	+1.4
93,376	+		Echvi_0093	0.88	-0.7
93,451	+				-0.8
93,467	+				-1.3
93,467	+				+0.8
93,467	+				+0.9
93,468	-				-2.6
93,497	+				+1.4
93,499	+				-0.9
93,499	+				+1.7
93,499	+				-1.4
93,500	-				-1.8
93,500	-				+0.8
93,500	-				-1.7
93,500	-				-3.8
93,500	-				+1.5
93,523	-				-0.3
93,566	+		Echvi_0094	0.10	+0.2
93,566	+		Echvi_0094	0.10	-0.8
93,567	-		Echvi_0094	0.10	-3.1
93,567	-		Echvi_0094	0.10	-0.8
93,567	-		Echvi_0094	0.10	+0.3
93,600	+		Echvi_0094	0.16	-0.8
93,601	-		Echvi_0094	0.16	+2.1
93,601	-		Echvi_0094	0.16	-0.9
93,601	-		Echvi_0094	0.16	-1.2
93,656	+		Echvi_0094	0.25	+0.9
93,684	-		Echvi_0094	0.30	-1.3
93,684	-		Echvi_0094	0.30	-1.6
93,697	+		Echvi_0094	0.32	+0.6
93,748	-		Echvi_0094	0.40	-0.4
93,831	-		Echvi_0094	0.54	+0.6
93,831	-		Echvi_0094	0.54	-1.8
93,902	-		Echvi_0094	0.66	-1.8
93,914	+		Echvi_0094	0.68	+2.5
93,914	+		Echvi_0094	0.68	-0.2
93,915	-		Echvi_0094	0.68	+0.1
93,930	+		Echvi_0094	0.70	+1.6
94,105	+				-3.0
94,105	+				+0.9
94,105	+				+1.4
94,114	-				-1.1
94,114	-				+0.4
94,124	+				+0.9
94,125	-				+0.3
94,129	-				+0.3
94,129	-				+0.4
94,212	+				-2.1
94,282	+		Echvi_0095	0.13	-1.4
94,283	-		Echvi_0095	0.13	+0.1
94,283	-		Echvi_0095	0.13	+0.3
94,302	+		Echvi_0095	0.15	-3.4
94,304	+		Echvi_0095	0.15	+1.1
94,304	+		Echvi_0095	0.15	-1.5
94,304	+		Echvi_0095	0.15	+0.6
94,304	+		Echvi_0095	0.15	+1.2
94,305	-		Echvi_0095	0.15	+0.8
94,305	-		Echvi_0095	0.15	+0.4
94,637	+		Echvi_0095	0.45	+0.4
94,657	+		Echvi_0095	0.46	+2.6
94,700	+		Echvi_0095	0.50	-1.0
94,709	-		Echvi_0095	0.51	-0.2
94,709	-		Echvi_0095	0.51	-1.9
94,710	+		Echvi_0095	0.51	+3.1
94,710	+		Echvi_0095	0.51	-0.6
94,711	-		Echvi_0095	0.51	-0.4
94,729	+		Echvi_0095	0.53	-1.8
94,730	-		Echvi_0095	0.53	-0.7
94,839	+		Echvi_0095	0.62	+0.9
94,880	+		Echvi_0095	0.66	-1.7
94,958	+		Echvi_0095	0.73	-1.2
94,959	-		Echvi_0095	0.73	+1.2
95,032	+		Echvi_0095	0.79	-0.1
95,127	-		Echvi_0095	0.88	-0.1
95,127	-		Echvi_0095	0.88	-1.8
95,156	-				-1.3
95,163	+				-0.2
95,163	+				+0.8
95,163	+				+3.2
95,163	+				-1.7
95,163	+				+0.2
95,163	+				-1.1
95,163	+				-0.7
95,163	+				-1.8
95,163	+				+0.6
95,164	-				+0.1
95,164	-				+0.4
95,164	-				+1.7
95,164	-				+3.6
95,164	-				+2.3
95,164	-				-1.2
95,221	+				+2.2
95,263	-				+1.1
95,276	+				+0.1
95,276	+				-1.2
95,277	-				+1.8
95,284	+				-2.2
95,390	+				-1.2
95,390	+				-2.2
95,390	+				+0.4
95,391	-				+1.9
95,400	+				+1.0
95,513	-		Echvi_0096	0.38	+2.3
95,649	+		Echvi_0096	0.80	-1.3
95,707	+				-0.8
95,707	+				-2.6
95,707	+				-0.2
95,708	-				-2.5
95,708	-				+0.7
95,761	+				+1.1
95,762	-				+1.0
95,768	+				-1.5
95,796	+				+0.2
95,796	+				-0.4
95,796	+				-2.5
95,797	-				+2.4
95,888	+				+1.4
95,901	-				-2.0
95,901	-				+0.5
96,199	+		Echvi_0097	0.25	+3.4
96,200	-		Echvi_0097	0.26	+2.6