Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0088

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
86,895	+		Echvi_0086	0.73	+1.0
86,896	-		Echvi_0086	0.73	-1.7
86,896	-		Echvi_0086	0.73	-1.6
86,902	-		Echvi_0086	0.73	+0.3
86,977	-		Echvi_0086	0.80	+1.4
87,136	+				-1.8
87,136	+				-1.1
87,137	-				+1.1
87,137	-				+1.0
87,137	-				+2.1
87,229	+				-0.9
87,230	-				+0.8
87,242	-				-2.9
87,856	+				-0.3
87,856	+				+2.4
87,857	-				+0.1
87,857	-				+0.8
87,863	+				-1.4
87,880	-				-0.3
88,935	-				+1.0
88,943	-				+2.6
89,007	+				-1.1
89,007	+				+0.1
89,007	+				+0.9
89,007	+				-0.6
89,007	+				+0.4
89,007	+				+0.5
89,007	+				-0.0
89,008	-				-0.9
89,066	-		Echvi_0089	0.16	-0.4
89,071	+		Echvi_0089	0.17	-2.3
89,071	+		Echvi_0089	0.17	-0.2
89,072	-		Echvi_0089	0.17	+2.2
89,072	-		Echvi_0089	0.17	-0.8
89,154	+		Echvi_0089	0.38	+1.4
89,155	-		Echvi_0089	0.38	-0.4
89,155	-		Echvi_0089	0.38	+0.1
89,155	-		Echvi_0089	0.38	+0.8
89,445	+				-3.4
89,450	+				-3.2
89,450	+				-2.3
89,451	-				+1.6
89,454	+				-2.6
89,508	+				-2.8
89,575	+				-0.8
89,575	+				-1.2
89,578	+				+0.4
89,591	-				+4.0
89,597	+				+0.7
89,597	+				-0.5
89,684	-		Echvi_0090	0.26	+3.0
89,761	+		Echvi_0090	0.50	+0.6
89,762	-		Echvi_0090	0.50	+2.3
89,811	+		Echvi_0090	0.65	-0.2