Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0080

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
80,219	-				+0.3
80,225	+				-1.8
80,225	+				-1.9
80,244	+				+1.1
80,245	-				+0.1
80,263	-				-1.6
80,278	+				+2.2
80,278	+				+1.6
80,282	+				+5.1
80,342	+				-1.7
80,342	+				+0.4
80,343	-				+0.5
80,383	+				+1.5
80,384	-				+1.2
80,384	-				-2.3
80,474	-				-0.4
80,531	+				-1.6
80,672	+				+0.2
80,673	-				+1.4
80,721	-		Echvi_0079	0.51	-0.3
80,798	-				-3.7
80,838	+				-0.8
80,839	-				-0.7
80,961	-				-1.5
81,057	+				-1.8
81,057	+				-1.9
81,197	+		Echvi_0080	0.21	-2.0
81,197	+		Echvi_0080	0.21	-1.2
81,197	+		Echvi_0080	0.21	-0.7
81,198	-		Echvi_0080	0.21	-2.1
81,198	-		Echvi_0080	0.21	-2.5
81,198	-		Echvi_0080	0.21	-2.1
81,269	-		Echvi_0080	0.27	-0.9
81,306	-		Echvi_0080	0.31	-1.8
81,385	+		Echvi_0080	0.38	+0.0
81,427	+		Echvi_0080	0.42	+2.4
81,427	+		Echvi_0080	0.42	-1.9
81,427	+		Echvi_0080	0.42	-2.2
81,428	-		Echvi_0080	0.42	-2.3
81,431	+		Echvi_0080	0.43	-1.8
81,434	-		Echvi_0080	0.43	-1.7
81,434	-		Echvi_0080	0.43	+1.4
81,539	+		Echvi_0080	0.53	-0.9
81,539	+		Echvi_0080	0.53	+2.4
81,540	-		Echvi_0080	0.53	-1.5
81,546	-		Echvi_0080	0.53	-2.0
81,552	+		Echvi_0080	0.54	+0.3
81,553	-		Echvi_0080	0.54	-2.8
81,554	+		Echvi_0080	0.54	-3.4
81,554	+		Echvi_0080	0.54	-0.2
81,555	-		Echvi_0080	0.54	-0.4
81,600	+		Echvi_0080	0.58	-1.5
81,737	+		Echvi_0080	0.71	-1.6
81,737	+		Echvi_0080	0.71	-2.7
81,737	+		Echvi_0080	0.71	-2.6
81,738	-		Echvi_0080	0.71	-3.2
81,738	-		Echvi_0080	0.71	-1.8
81,756	+		Echvi_0080	0.73	+1.4
81,769	+		Echvi_0080	0.74	-1.5
81,770	-		Echvi_0080	0.74	+1.4
81,770	-		Echvi_0080	0.74	-2.2
81,770	-		Echvi_0080	0.74	-1.3
81,770	-		Echvi_0080	0.74	-1.3
81,787	+		Echvi_0080	0.76	+0.4
81,787	+		Echvi_0080	0.76	-1.3
81,789	+		Echvi_0080	0.76	-0.9
81,789	+		Echvi_0080	0.76	-0.1
81,789	+		Echvi_0080	0.76	-2.5
81,789	+		Echvi_0080	0.76	-0.8
81,789	+		Echvi_0080	0.76	-3.1
81,789	+		Echvi_0080	0.76	-3.7
81,790	-		Echvi_0080	0.76	-0.8
81,790	-		Echvi_0080	0.76	-3.7
81,790	-		Echvi_0080	0.76	-1.6
81,790	-		Echvi_0080	0.76	+0.3
81,790	-		Echvi_0080	0.76	-1.5
81,790	-		Echvi_0080	0.76	-0.9
81,790	-		Echvi_0080	0.76	+0.1
81,790	-		Echvi_0080	0.76	-1.3
81,794	+		Echvi_0080	0.76	+2.7
81,794	+		Echvi_0080	0.76	-2.9
81,794	+		Echvi_0080	0.76	-1.5
81,796	+		Echvi_0080	0.76	-2.6
81,796	+		Echvi_0080	0.76	-0.0
81,796	+		Echvi_0080	0.76	-1.7
81,797	-		Echvi_0080	0.77	+0.1
81,836	+		Echvi_0080	0.80	-0.6
81,836	+		Echvi_0080	0.80	-1.3
81,837	-		Echvi_0080	0.80	-1.9
81,876	-		Echvi_0080	0.84	-3.1
81,909	+		Echvi_0080	0.87	-2.5
81,952	+				+1.4
81,952	+				-0.3
81,953	-				+0.6
81,979	+				-3.1
81,979	+				+1.6
81,979	+				-0.9
81,979	+				+0.5
81,980	-				+0.8
81,980	-				-2.5
81,980	-				+0.1
81,980	-				+0.4
81,980	-				-2.0
81,980	-				-1.7
81,980	-				-2.5
81,980	-				-1.5
82,023	-				+0.1
82,026	+				-0.8
82,088	-				+0.8
82,114	+				+0.4
82,114	+				-1.3
82,114	+				-1.8
82,114	+				-1.7
82,145	+		Echvi_0081	0.13	-2.4
82,146	-		Echvi_0081	0.13	+2.8
82,156	+		Echvi_0081	0.14	-1.9
82,156	+		Echvi_0081	0.14	-0.9
82,159	-		Echvi_0081	0.15	-2.9
82,203	+		Echvi_0081	0.20	+0.1
82,203	+		Echvi_0081	0.20	-1.1
82,226	+		Echvi_0081	0.23	-0.8
82,226	+		Echvi_0081	0.23	-1.8
82,282	+		Echvi_0081	0.30	-1.2
82,295	+		Echvi_0081	0.32	-1.1
82,295	+		Echvi_0081	0.32	+2.3
82,526	+		Echvi_0081	0.62	+2.8
82,526	+				+0.4
82,527	-		Echvi_0081	0.62	+3.2
82,590	+		Echvi_0081	0.70	+2.4
82,590	+		Echvi_0081	0.70	-0.8
82,590	+		Echvi_0081	0.70	-0.6
82,647	-		Echvi_0081	0.77	+0.9
82,707	-		Echvi_0081	0.85	+0.5
82,720	-		Echvi_0081	0.87	-0.2
82,791	+				-1.5
82,792	-				+2.6
82,792	-				+1.8
82,793	+				+1.4
82,793	+				-1.2
82,794	-				+4.2
82,794	-				+4.0
82,795	+				-1.2
82,795	+				-1.0
82,795	+				+1.2
82,796	-				-2.5
82,814	-				+3.6
82,826	+				+0.9
82,826	+				-0.7
82,826	+				-0.4
82,826	+				+2.6
82,827	-				-1.2
82,827	-				+0.7
82,868	+				-1.4
82,874	-				+3.7
82,894	+				+1.8
82,894	+				-2.6
83,025	+		Echvi_0082	0.18	-0.6
83,038	+		Echvi_0082	0.20	-2.1