Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0071 and Echvi_0072 are separated by 208 nucleotides Echvi_0072 and Echvi_0073 are separated by 59 nucleotides
Echvi_0071: Echvi_0071 - RNA polymerase sigma-54 factor, at 71,686 to 73,137
_0071
Echvi_0072: Echvi_0072 - asparaginyl-tRNA synthetase, at 73,346 to 74,797
_0072
Echvi_0073: Echvi_0073 - yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region, at 74,857 to 76,368
_0073
Position (kb) 73
74
75 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 73.152 kb on + strand at 73.152 kb on + strand at 73.190 kb on + strand at 73.193 kb on + strand at 73.258 kb on + strand at 73.258 kb on + strand at 73.258 kb on + strand at 73.283 kb on + strand at 73.301 kb on + strand at 73.319 kb on + strand at 73.322 kb on + strand at 73.322 kb on + strand at 74.795 kb on + strand at 74.796 kb on - strand at 74.802 kb on + strand at 74.802 kb on + strand at 74.802 kb on + strand at 74.803 kb on - strand at 74.803 kb on - strand at 74.803 kb on - strand at 74.803 kb on - strand at 74.803 kb on - strand at 74.803 kb on - strand at 74.803 kb on - strand at 74.803 kb on - strand at 74.805 kb on + strand at 74.806 kb on - strand at 74.806 kb on - strand at 74.806 kb on - strand at 74.806 kb on - strand at 74.806 kb on - strand at 74.807 kb on + strand at 74.807 kb on + strand at 74.971 kb on + strand at 75.003 kb on - strand at 75.066 kb on + strand, within Echvi_0073 at 75.067 kb on - strand, within Echvi_0073 at 75.118 kb on - strand, within Echvi_0073 at 75.123 kb on + strand, within Echvi_0073 at 75.123 kb on + strand, within Echvi_0073 at 75.124 kb on - strand, within Echvi_0073 at 75.196 kb on - strand, within Echvi_0073 at 75.196 kb on - strand, within Echvi_0073 at 75.237 kb on + strand, within Echvi_0073 at 75.262 kb on - strand, within Echvi_0073 at 75.270 kb on - strand, within Echvi_0073 at 75.298 kb on + strand, within Echvi_0073 at 75.298 kb on + strand, within Echvi_0073 at 75.299 kb on - strand, within Echvi_0073 at 75.306 kb on + strand, within Echvi_0073 at 75.339 kb on - strand, within Echvi_0073 at 75.432 kb on + strand, within Echvi_0073 at 75.508 kb on + strand, within Echvi_0073 at 75.508 kb on + strand, within Echvi_0073 at 75.509 kb on - strand, within Echvi_0073 at 75.595 kb on + strand, within Echvi_0073 at 75.595 kb on + strand, within Echvi_0073 at 75.595 kb on + strand, within Echvi_0073 at 75.605 kb on + strand, within Echvi_0073 at 75.667 kb on - strand, within Echvi_0073 at 75.702 kb on - strand, within Echvi_0073 at 75.708 kb on + strand, within Echvi_0073 at 75.708 kb on + strand, within Echvi_0073 at 75.709 kb on - strand, within Echvi_0073 at 75.776 kb on + strand, within Echvi_0073
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 73,152 + +1.7 73,152 + -1.3 73,190 + +1.5 73,193 + +0.6 73,258 + -0.6 73,258 + -2.1 73,258 + +0.9 73,283 + +2.2 73,301 + -1.6 73,319 + -1.6 73,322 + -2.0 73,322 + -1.8 74,795 + +1.1 74,796 - +1.1 74,802 + -1.4 74,802 + -0.6 74,802 + -1.4 74,803 - -3.0 74,803 - -0.6 74,803 - +0.3 74,803 - +1.6 74,803 - -0.2 74,803 - +3.4 74,803 - +1.9 74,803 - -0.2 74,805 + -2.3 74,806 - +1.3 74,806 - -3.5 74,806 - -1.5 74,806 - +0.2 74,806 - +0.2 74,807 + -1.5 74,807 + -1.8 74,971 + +1.4 75,003 - -0.6 75,066 + Echvi_0073 0.14 -1.1 75,067 - Echvi_0073 0.14 -0.4 75,118 - Echvi_0073 0.17 +1.2 75,123 + Echvi_0073 0.18 -0.8 75,123 + Echvi_0073 0.18 +2.4 75,124 - Echvi_0073 0.18 -0.1 75,196 - Echvi_0073 0.22 +2.4 75,196 - Echvi_0073 0.22 +0.9 75,237 + Echvi_0073 0.25 -0.4 75,262 - Echvi_0073 0.27 -1.7 75,270 - Echvi_0073 0.27 -0.4 75,298 + Echvi_0073 0.29 -2.3 75,298 + Echvi_0073 0.29 +0.5 75,299 - Echvi_0073 0.29 +1.5 75,306 + Echvi_0073 0.30 +1.7 75,339 - Echvi_0073 0.32 -2.2 75,432 + Echvi_0073 0.38 +2.1 75,508 + Echvi_0073 0.43 -1.5 75,508 + Echvi_0073 0.43 +1.2 75,509 - Echvi_0073 0.43 -0.8 75,595 + Echvi_0073 0.49 +1.5 75,595 + Echvi_0073 0.49 +0.8 75,595 + Echvi_0073 0.49 -0.8 75,605 + Echvi_0073 0.49 -1.2 75,667 - Echvi_0073 0.54 +0.4 75,702 - Echvi_0073 0.56 +2.0 75,708 + Echvi_0073 0.56 -2.0 75,708 + Echvi_0073 0.56 -1.7 75,709 - Echvi_0073 0.56 -0.0 75,776 + Echvi_0073 0.61 +0.2
Or see this region's nucleotide sequence