Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0032

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
29,451	-		Echvi_0031	0.14	-1.2
29,451	-		Echvi_0031	0.14	-0.3
29,468	+		Echvi_0031	0.16	+0.1
29,469	-		Echvi_0031	0.16	-1.5
29,469	-		Echvi_0031	0.16	+0.3
29,469	-		Echvi_0031	0.16	-0.8
29,469	-		Echvi_0031	0.16	-1.8
29,469	-		Echvi_0031	0.16	+1.1
29,507	+		Echvi_0031	0.20	-1.8
29,537	+		Echvi_0031	0.23	-1.3
29,556	-		Echvi_0031	0.25	-0.9
29,744	+		Echvi_0031	0.45	+0.6
29,745	-		Echvi_0031	0.45	+0.1
29,891	+		Echvi_0031	0.60	+0.1
29,899	+		Echvi_0031	0.61	-0.2
30,062	-		Echvi_0031	0.78	-1.2
30,071	+		Echvi_0031	0.79	-1.8
30,072	-		Echvi_0031	0.79	+2.7
30,143	+		Echvi_0031	0.87	+1.5
30,292	+				-3.6
30,292	+				+2.9
30,316	+				+0.9
30,316	+				+0.9
30,317	-				+0.3
30,381	+				-3.0
30,384	+				+0.4
30,385	-				-1.1
30,405	+				-2.8
30,406	-				+0.8
30,406	-				+0.9
30,447	+				+1.5
30,572	+		Echvi_0032	0.17	-1.5
30,572	+		Echvi_0032	0.17	+2.0
30,711	+		Echvi_0032	0.27	+0.9
30,712	-		Echvi_0032	0.27	-2.8
30,813	+		Echvi_0032	0.35	+1.7
30,813	+		Echvi_0032	0.35	+1.2
30,814	-		Echvi_0032	0.35	-2.1
30,814	-		Echvi_0032	0.35	+1.4
31,010	+		Echvi_0032	0.50	+0.5
31,010	+		Echvi_0032	0.50	+0.8
31,010	+		Echvi_0032	0.50	-0.5
31,011	-		Echvi_0032	0.50	-1.7
31,011	-		Echvi_0032	0.50	+0.1
31,014	+		Echvi_0032	0.50	+1.2
31,015	-		Echvi_0032	0.50	-0.6
31,159	-		Echvi_0032	0.61	-2.3
31,159	-		Echvi_0032	0.61	+0.4
31,161	-		Echvi_0032	0.61	+1.4
31,170	+		Echvi_0032	0.62	-1.3
31,170	+		Echvi_0032	0.62	-0.2
31,175	+		Echvi_0032	0.63	-1.8
31,175	+		Echvi_0032	0.63	-2.4
31,228	-		Echvi_0032	0.67	+0.7
31,239	+		Echvi_0032	0.67	-0.5
31,266	+		Echvi_0032	0.69	-2.0
31,266	+		Echvi_0032	0.69	+1.0
31,266	+		Echvi_0032	0.69	-2.6
31,272	+		Echvi_0032	0.70	+0.8
31,273	-		Echvi_0032	0.70	-2.2
31,277	+		Echvi_0032	0.70	+1.5
31,297	-		Echvi_0032	0.72	-0.8
31,458	-		Echvi_0032	0.84	+2.3
31,464	-		Echvi_0032	0.85	+0.8
31,521	+		Echvi_0032	0.89	-0.2
31,521	+		Echvi_0032	0.89	-1.0
31,521	+		Echvi_0032	0.89	-2.4
31,522	-		Echvi_0032	0.89	+0.4
31,522	-		Echvi_0032	0.89	-2.0
31,522	-		Echvi_0032	0.89	+1.6
31,619	+				+2.4
31,620	-				-4.0
31,890	+				-1.3
31,920	-				-2.5
32,017	+		Echvi_0034	0.13	-0.2
32,038	+		Echvi_0034	0.15	-2.5
32,048	+		Echvi_0034	0.15	-1.6
32,049	-		Echvi_0034	0.15	-0.9
32,049	-		Echvi_0034	0.15	+0.9
32,172	+		Echvi_0034	0.23	+0.6
32,172	+		Echvi_0034	0.23	+1.7
32,172	+		Echvi_0034	0.23	+1.0
32,172	+		Echvi_0034	0.23	-0.2
32,179	+		Echvi_0034	0.23	-0.4
32,180	-		Echvi_0034	0.23	-1.2
32,283	+		Echvi_0034	0.29	-0.9
32,284	-		Echvi_0034	0.29	+0.8
32,362	+		Echvi_0034	0.34	-0.8
32,369	-		Echvi_0034	0.34	+0.1
32,369	-		Echvi_0034	0.34	-0.8
32,446	+		Echvi_0034	0.39	-2.1
32,455	-		Echvi_0034	0.39	-1.3
32,455	-		Echvi_0034	0.39	-1.7
32,517	+		Echvi_0034	0.43	-2.1