Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3509

Experiment: m.b. D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.032 mg/ml
4,157,927	+				-0.1
4,157,975	+				+0.5
4,157,976	-				+1.7
4,157,994	+				+0.5
4,157,995	-				-0.8
4,158,021	+				-0.4
4,158,021	+				+1.4
4,158,041	+				-0.6
4,158,041	+				+0.2
4,158,042	-				+0.9
4,158,042	-				-0.6
4,158,045	+				-0.7
4,158,077	-				+0.4
4,158,102	+				+0.0
4,158,102	+				-1.3
4,158,114	-				+0.4
4,158,116	+				-0.1
4,158,140	-				+0.1
4,158,154	+				+0.1
4,158,175	-		Echvi_3508	0.10	+0.2
4,158,191	+		Echvi_3508	0.14	+1.1
4,158,191	+		Echvi_3508	0.14	+1.4
4,158,210	+		Echvi_3508	0.18	-0.4
4,158,210	+		Echvi_3508	0.18	+0.4
4,158,210	+		Echvi_3508	0.18	+0.5
4,158,273	+		Echvi_3508	0.32	-0.9
4,158,273	+		Echvi_3508	0.32	+0.4
4,158,273	+		Echvi_3508	0.32	+0.1
4,158,274	-		Echvi_3508	0.32	-0.5
4,158,274	-		Echvi_3508	0.32	-1.4
4,158,335	-		Echvi_3508	0.45	-0.2
4,158,342	+		Echvi_3508	0.47	+0.8
4,158,386	+		Echvi_3508	0.56	+1.3
4,158,420	+		Echvi_3508	0.64	-0.7
4,158,463	-		Echvi_3508	0.73	-0.6
4,158,504	-		Echvi_3508	0.82	-0.1
4,158,539	+				+0.4
4,158,583	-				+0.0
4,158,597	+				-0.1
4,158,621	+				-1.1
4,158,721	+				+1.0
4,158,721	+				-0.8
4,158,722	-				-0.8
4,158,731	-				+0.8
4,158,735	+				-0.6
4,158,736	-				+0.7
4,158,781	-				-0.6
4,158,781	-				-0.5
4,158,784	+				-0.2
4,158,824	-				-0.7
4,158,841	+				+1.7
4,158,842	-				-2.9
4,158,843	+				-0.6
4,158,843	+				-2.4
4,158,844	-				-0.4
4,158,844	-				+0.1
4,158,848	+				+0.6
4,158,849	-				-0.5
4,159,475	-		Echvi_3509	0.45	-1.4
4,159,869	-		Echvi_3509	0.73	-0.2
4,160,288	-				-1.6
4,160,396	-				-1.5
4,160,449	-				-0.4
4,160,465	+				+1.6
4,160,465	+				-2.3
4,160,465	+				+1.0
4,160,468	+				+1.2
4,160,468	+				-0.4
4,160,470	+				-1.1
4,160,471	-				-0.4
4,160,563	+		Echvi_3510	0.14	-0.2
4,160,663	-		Echvi_3510	0.23	-0.4
4,160,663	-		Echvi_3510	0.23	-0.3
4,160,664	+		Echvi_3510	0.23	-0.0
4,160,665	-		Echvi_3510	0.23	-0.2
4,160,665	-		Echvi_3510	0.23	-1.4
4,160,697	-		Echvi_3510	0.26	-0.1
4,160,697	-		Echvi_3510	0.26	-0.6
4,160,697	-		Echvi_3510	0.26	-0.5
4,160,697	-		Echvi_3510	0.26	-0.7
4,160,697	-		Echvi_3510	0.26	-0.4
4,160,697	-		Echvi_3510	0.26	-1.3
4,160,739	-		Echvi_3510	0.29	-1.8
4,160,739	-		Echvi_3510	0.29	-0.6
4,160,815	+		Echvi_3510	0.36	-2.2
4,160,822	-		Echvi_3510	0.36	+0.8
4,160,822	-		Echvi_3510	0.36	+0.0
4,160,897	+		Echvi_3510	0.43	+0.7
4,160,951	+		Echvi_3510	0.48	+0.2
4,160,951	+		Echvi_3510	0.48	+1.0
4,160,952	-		Echvi_3510	0.48	-1.6
4,160,956	-		Echvi_3510	0.48	+2.3
4,160,967	-		Echvi_3510	0.49	+0.2
4,161,014	+				+0.8
4,161,014	+		Echvi_3510	0.53	+4.2
4,161,033	+		Echvi_3510	0.55	-1.2
4,161,058	+		Echvi_3510	0.57	-0.0
4,161,058	+		Echvi_3510	0.57	-0.6
4,161,062	+		Echvi_3510	0.57	+0.8
4,161,109	+		Echvi_3510	0.62	+1.1
4,161,109	+		Echvi_3510	0.62	-0.9
4,161,109	+		Echvi_3510	0.62	+0.4
4,161,110	-		Echvi_3510	0.62	+0.8
4,161,134	-		Echvi_3510	0.64	-0.8
4,161,134	-		Echvi_3510	0.64	-0.6
4,161,134	-		Echvi_3510	0.64	+0.5
4,161,134	-		Echvi_3510	0.64	+0.9
4,161,134	-		Echvi_3510	0.64	+0.4
4,161,163	+		Echvi_3510	0.66	+0.2
4,161,212	+		Echvi_3510	0.71	-0.2
4,161,213	-		Echvi_3510	0.71	-0.9
4,161,216	+		Echvi_3510	0.71	-1.4
4,161,216	+		Echvi_3510	0.71	-0.4
4,161,217	-		Echvi_3510	0.71	+0.8
4,161,217	-		Echvi_3510	0.71	-0.4
4,161,217	-		Echvi_3510	0.71	+0.2
4,161,218	+		Echvi_3510	0.71	-0.9