Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1525 and Echvi_1526 overlap by 41 nucleotides Echvi_1526 and Echvi_1527 are separated by 126 nucleotides
Echvi_1525: Echvi_1525 - hypothetical protein, at 1,750,206 to 1,751,612
_1525
Echvi_1526: Echvi_1526 - Glycogen synthase, at 1,751,572 to 1,752,387
_1526
Echvi_1527: Echvi_1527 - pantoate--beta-alanine ligase, at 1,752,514 to 1,753,371
_1527
Position (kb)
1751
1752
1753 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1750.575 kb on - strand, within Echvi_1525 at 1750.609 kb on - strand, within Echvi_1525 at 1750.726 kb on - strand, within Echvi_1525 at 1750.749 kb on - strand, within Echvi_1525 at 1750.749 kb on - strand, within Echvi_1525 at 1750.775 kb on - strand, within Echvi_1525 at 1750.839 kb on - strand, within Echvi_1525 at 1750.862 kb on - strand, within Echvi_1525 at 1750.862 kb on - strand, within Echvi_1525 at 1750.869 kb on - strand, within Echvi_1525 at 1750.869 kb on - strand, within Echvi_1525 at 1750.887 kb on - strand, within Echvi_1525 at 1750.887 kb on - strand, within Echvi_1525 at 1750.887 kb on - strand, within Echvi_1525 at 1750.941 kb on - strand, within Echvi_1525 at 1750.948 kb on - strand, within Echvi_1525 at 1751.121 kb on - strand, within Echvi_1525 at 1751.174 kb on - strand, within Echvi_1525 at 1751.174 kb on - strand, within Echvi_1525 at 1751.208 kb on - strand, within Echvi_1525 at 1751.337 kb on - strand, within Echvi_1525 at 1751.342 kb on - strand, within Echvi_1525 at 1751.398 kb on - strand, within Echvi_1525 at 1751.418 kb on - strand, within Echvi_1525 at 1751.418 kb on - strand, within Echvi_1525 at 1751.418 kb on - strand, within Echvi_1525 at 1751.418 kb on - strand, within Echvi_1525 at 1751.547 kb on - strand at 1751.547 kb on - strand at 1751.551 kb on - strand at 1751.557 kb on - strand at 1751.574 kb on - strand at 1752.431 kb on - strand at 1752.501 kb on + strand at 1752.501 kb on + strand at 1752.501 kb on + strand at 1752.501 kb on + strand at 1752.510 kb on + strand at 1752.510 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 1,750,575 - Echvi_1525 0.26 +0.4 1,750,609 - Echvi_1525 0.29 -0.4 1,750,726 - Echvi_1525 0.37 +0.3 1,750,749 - Echvi_1525 0.39 -0.4 1,750,749 - Echvi_1525 0.39 -0.4 1,750,775 - Echvi_1525 0.40 +0.2 1,750,839 - Echvi_1525 0.45 -0.8 1,750,862 - Echvi_1525 0.47 +0.0 1,750,862 - Echvi_1525 0.47 -0.4 1,750,869 - Echvi_1525 0.47 -0.0 1,750,869 - Echvi_1525 0.47 +0.4 1,750,887 - Echvi_1525 0.48 +1.2 1,750,887 - Echvi_1525 0.48 +0.3 1,750,887 - Echvi_1525 0.48 +1.5 1,750,941 - Echvi_1525 0.52 +1.9 1,750,948 - Echvi_1525 0.53 +1.2 1,751,121 - Echvi_1525 0.65 +1.5 1,751,174 - Echvi_1525 0.69 +0.8 1,751,174 - Echvi_1525 0.69 +1.8 1,751,208 - Echvi_1525 0.71 -1.4 1,751,337 - Echvi_1525 0.80 -0.2 1,751,342 - Echvi_1525 0.81 +0.7 1,751,398 - Echvi_1525 0.85 +0.2 1,751,418 - Echvi_1525 0.86 +1.1 1,751,418 - Echvi_1525 0.86 +2.3 1,751,418 - Echvi_1525 0.86 +0.4 1,751,418 - Echvi_1525 0.86 +1.0 1,751,547 - +1.3 1,751,547 - +1.8 1,751,551 - +0.6 1,751,557 - +2.0 1,751,574 - +0.8 1,752,431 - -0.4 1,752,501 + -0.7 1,752,501 + +0.8 1,752,501 + +0.5 1,752,501 + -2.9 1,752,510 + +0.4 1,752,510 + -0.0
Or see this region's nucleotide sequence