Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0151

Experiment: m.b. D-Cycloserine 0.032 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_0150 and Echvi_0151 are separated by 9 nucleotidesEchvi_0151 and Echvi_0152 are separated by 219 nucleotides Echvi_0150: Echvi_0150 - glutamate-1-semialdehyde-2,1-aminomutase, at 149,785 to 151,074 _0150 Echvi_0151: Echvi_0151 - ABC-type branched-chain amino acid transport systems, periplasmic component, at 151,084 to 152,757 _0151 Echvi_0152: Echvi_0152 - GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit, at 152,977 to 154,506 _0152 Position (kb) 151 152 153Strain fitness (log2 ratio) -1 0 1at 151.076 kb on - strandat 151.114 kb on - strandat 151.874 kb on - strand, within Echvi_0151at 152.772 kb on + strandat 152.773 kb on - strandat 152.822 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml
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151,076 - -0.7
151,114 - +0.6
151,874 - Echvi_0151 0.47 -1.2
152,772 + -1.2
152,773 - -0.1
152,822 - -0.8

Or see this region's nucleotide sequence