Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4677

Experiment: m.b. D-Cycloserine 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.016 mg/ml
5,597,814	+		Echvi_4675	0.82	+0.2
5,597,820	+		Echvi_4675	0.83	+0.5
5,597,821	-		Echvi_4675	0.83	-0.8
5,597,821	-		Echvi_4675	0.83	+0.2
5,597,855	+		Echvi_4675	0.86	+0.1
5,597,856	-		Echvi_4675	0.86	-0.5
5,597,860	+		Echvi_4675	0.86	+2.1
5,597,980	-				-1.1
5,597,986	-				-0.8
5,597,986	-				-2.0
5,598,061	+				+0.7
5,598,076	+				+0.1
5,598,077	-				+0.2
5,598,077	-				+0.1
5,598,077	-				-0.3
5,598,085	+				+0.8
5,598,086	-				-0.5
5,598,086	-				-0.0
5,598,086	-				-0.7
5,598,086	-				+0.2
5,598,111	+				+0.2
5,598,112	-				-0.9
5,598,262	-		Echvi_4676	0.33	-0.1
5,598,285	+		Echvi_4676	0.37	+0.1
5,598,289	+		Echvi_4676	0.38	+0.3
5,598,289	+		Echvi_4676	0.38	+0.2
5,598,289	+		Echvi_4676	0.38	+0.6
5,598,289	+		Echvi_4676	0.38	-0.4
5,598,289	+		Echvi_4676	0.38	-0.3
5,598,293	+		Echvi_4676	0.38	+0.2
5,598,294	-		Echvi_4676	0.38	-0.8
5,598,369	+		Echvi_4676	0.51	+1.1
5,598,370	-		Echvi_4676	0.51	-1.4
5,598,370	-		Echvi_4676	0.51	-0.5
5,598,451	+		Echvi_4676	0.65	-1.6
5,598,457	+		Echvi_4676	0.66	-0.1
5,598,457	+		Echvi_4676	0.66	-0.2
5,598,469	-		Echvi_4676	0.67	+0.4
5,598,469	-		Echvi_4676	0.67	+0.2
5,598,539	+		Echvi_4676	0.79	+1.2
5,598,629	-				-0.2
5,598,640	+				+0.2
5,598,640	+				+0.9
5,598,640	+				-1.7
5,598,642	+				+3.1
5,598,643	-				+1.1
5,598,666	+				-0.9
5,598,667	-				-1.2
5,598,705	+				-1.0
5,598,706	-				+0.8
5,598,744	+				+0.2
5,598,872	+				+0.4
5,598,878	+				-0.2
5,598,904	+		Echvi_4677	0.11	+0.8
5,598,927	-		Echvi_4677	0.13	-1.1
5,598,973	+		Echvi_4677	0.17	-1.0
5,598,990	+		Echvi_4677	0.19	+0.2
5,598,990	+		Echvi_4677	0.19	-0.6
5,598,993	+		Echvi_4677	0.19	-0.8
5,598,994	-		Echvi_4677	0.19	-1.0
5,598,994	-		Echvi_4677	0.19	+0.3
5,599,043	+		Echvi_4677	0.24	-0.5
5,599,208	-		Echvi_4677	0.38	-1.6
5,599,208	-		Echvi_4677	0.38	-0.5
5,599,208	-		Echvi_4677	0.38	-1.0
5,599,233	-		Echvi_4677	0.40	-1.5
5,599,233	-		Echvi_4677	0.40	-2.9
5,599,244	+		Echvi_4677	0.41	-0.5
5,599,289	+		Echvi_4677	0.45	-0.6
5,599,290	-		Echvi_4677	0.45	-2.0
5,599,330	+		Echvi_4677	0.49	-2.4
5,599,331	-		Echvi_4677	0.49	-0.4
5,599,439	-		Echvi_4677	0.58	+1.8
5,599,449	+		Echvi_4677	0.59	+0.6
5,599,583	-		Echvi_4677	0.71	-1.2
5,599,585	-		Echvi_4677	0.71	-1.1
5,599,759	+		Echvi_4677	0.86	+1.8
5,599,762	-		Echvi_4677	0.87	+0.2
5,599,762	-		Echvi_4677	0.87	-0.8
5,599,801	+				+0.2
5,599,908	-				+0.8
5,600,235	-		Echvi_4678	0.30	+1.1
5,600,235	-		Echvi_4678	0.30	-1.0
5,600,253	-		Echvi_4678	0.31	-0.3
5,600,284	-		Echvi_4678	0.34	+4.1
5,600,453	+		Echvi_4678	0.50	+0.3
5,600,456	+		Echvi_4678	0.51	-1.6
5,600,457	-		Echvi_4678	0.51	-0.1
5,600,457	-		Echvi_4678	0.51	-0.2
5,600,457	-		Echvi_4678	0.51	-0.0
5,600,457	-		Echvi_4678	0.51	-0.4
5,600,493	+		Echvi_4678	0.54	+1.2
5,600,612	-		Echvi_4678	0.65	-2.0
5,600,613	+		Echvi_4678	0.65	-0.2
5,600,849	+		Echvi_4678	0.88	-0.7
5,600,850	-		Echvi_4678	0.88	-0.5
5,600,850	-		Echvi_4678	0.88	-0.2