Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3857

Experiment: m.b. D-Cycloserine 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.016 mg/ml
4,607,876	-				+0.1
4,607,876	-				-2.0
4,607,895	-				-0.6
4,608,195	+		Echvi_3856	0.17	-0.8
4,608,195	+		Echvi_3856	0.17	+0.1
4,608,197	+		Echvi_3856	0.19	-0.4
4,608,197	+		Echvi_3856	0.19	+0.4
4,608,197	+		Echvi_3856	0.19	-0.4
4,608,197	+		Echvi_3856	0.19	+0.1
4,608,248	-		Echvi_3856	0.54	+0.1
4,608,248	-		Echvi_3856	0.54	+0.7
4,608,257	-		Echvi_3856	0.60	+0.7
4,608,270	-		Echvi_3856	0.69	-0.2
4,608,270	-		Echvi_3856	0.69	-1.3
4,608,270	-		Echvi_3856	0.69	-0.2
4,608,270	-		Echvi_3856	0.69	-0.4
4,608,271	+		Echvi_3856	0.70	+0.5
4,608,271	+		Echvi_3856	0.70	-0.4
4,608,271	+		Echvi_3856	0.70	-0.6
4,608,271	+		Echvi_3856	0.70	+0.0
4,608,272	-		Echvi_3856	0.71	+0.0
4,608,272	-		Echvi_3856	0.71	+0.5
4,608,272	-		Echvi_3856	0.71	-0.3
4,608,329	-				+0.0
4,608,378	+				+0.8
4,608,416	-				-1.5
4,608,423	+				-0.6
4,608,437	+				-1.1
4,608,456	+				-2.4
4,608,486	+				+0.0
4,608,546	-				+0.8
4,608,665	+				-0.9
4,608,802	+				-0.1
4,608,848	+				+0.2
4,608,848	+				-0.6
4,608,849	-				+0.0
4,608,941	+				-0.3
4,608,941	+				-1.1
4,608,942	-				+1.2
4,609,275	+		Echvi_3857	0.17	+1.2
4,609,556	+		Echvi_3857	0.28	-0.2
4,609,557	-		Echvi_3857	0.28	-0.7
4,609,863	+		Echvi_3857	0.41	-1.7
4,609,928	+		Echvi_3857	0.43	+0.6
4,610,199	+		Echvi_3857	0.55	-1.5
4,610,420	-		Echvi_3857	0.64	-0.7
4,610,420	-		Echvi_3857	0.64	-0.4
4,610,420	-		Echvi_3857	0.64	+1.0
4,610,681	+		Echvi_3857	0.74	+0.0
4,610,693	+		Echvi_3857	0.75	+1.8
4,611,021	-		Echvi_3857	0.88	-2.1
4,611,110	+				-0.7
4,611,111	-				+0.2
4,611,194	-				+0.2
4,611,237	+				-0.6
4,611,239	+				+0.6
4,611,240	-				+0.7
4,611,240	-				+0.5
4,611,240	-				+0.5
4,611,242	+				-0.4
4,611,263	+				-1.0
4,611,263	+				-0.4
4,611,263	+				-0.1
4,611,308	+				-0.3
4,611,308	+				-0.7
4,611,308	+				-0.9
4,611,308	+				-0.3
4,611,309	-				+0.4
4,611,377	-		Echvi_3858	0.12	-0.6
4,611,472	+		Echvi_3858	0.26	+0.9
4,611,472	+		Echvi_3858	0.26	+1.3
4,611,492	+		Echvi_3858	0.28	+1.3
4,611,492	+		Echvi_3858	0.28	+0.8
4,611,611	+		Echvi_3858	0.45	-0.1
4,611,612	-		Echvi_3858	0.45	-0.1
4,611,715	-		Echvi_3858	0.60	-0.4
4,611,730	+		Echvi_3858	0.62	-0.2
4,611,758	+		Echvi_3858	0.66	+0.3
4,611,864	-		Echvi_3858	0.81	-0.2
4,611,864	-		Echvi_3858	0.81	+0.5
4,611,876	-		Echvi_3858	0.82	-0.2
4,612,022	+				-0.1
4,612,022	+				+0.0
4,612,022	+				-1.2
4,612,022	+				+0.3
4,612,023	-				-0.2
4,612,023	-				+0.2
4,612,023	-				-1.5
4,612,032	+				+0.1
4,612,033	-				+0.0
4,612,078	+				+0.5
4,612,207	+		Echvi_3859	0.21	-0.6
4,612,207	+		Echvi_3859	0.21	-0.5
4,612,207	+		Echvi_3859	0.21	+0.5
4,612,208	-		Echvi_3859	0.22	+0.2
4,612,208	-		Echvi_3859	0.22	+1.0
4,612,211	+		Echvi_3859	0.22	-0.3