Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3682

Experiment: m.b. D-Cycloserine 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.016 mg/ml
4,384,346	-				-0.1
4,384,346	-				+1.9
4,384,403	-				+0.1
4,384,435	+				+0.6
4,384,495	-		Echvi_3680	0.17	-0.4
4,384,648	-		Echvi_3680	0.64	+0.1
4,384,648	-		Echvi_3680	0.64	-0.5
4,384,648	-		Echvi_3680	0.64	+0.4
4,384,648	-		Echvi_3680	0.64	-0.2
4,384,648	-		Echvi_3680	0.64	-2.0
4,384,734	+				-0.5
4,384,734	+				-1.7
4,384,734	+				-0.2
4,384,735	-				-0.1
4,384,735	-				-0.3
4,384,735	-				-0.2
4,384,735	-				-0.7
4,384,738	-				-0.7
4,384,822	-		Echvi_3681	0.12	-1.0
4,384,867	-		Echvi_3681	0.21	-0.8
4,385,035	+		Echvi_3681	0.54	-1.3
4,385,035	+		Echvi_3681	0.54	+0.2
4,385,036	-		Echvi_3681	0.54	-0.6
4,385,038	-		Echvi_3681	0.55	-0.3
4,385,038	-		Echvi_3681	0.55	+0.2
4,385,158	+		Echvi_3681	0.79	-1.2
4,385,159	-		Echvi_3681	0.79	+0.4
4,385,311	+				-0.3
4,385,404	+		Echvi_3682	0.14	-0.7
4,385,444	+		Echvi_3682	0.22	-1.6
4,385,445	-		Echvi_3682	0.22	+0.2
4,385,468	+		Echvi_3682	0.27	-0.8
4,385,468	+		Echvi_3682	0.27	-1.7
4,385,469	-		Echvi_3682	0.27	-2.0
4,385,501	+		Echvi_3682	0.34	-0.4
4,385,502	-		Echvi_3682	0.34	-0.5
4,385,630	+		Echvi_3682	0.61	-0.6
4,385,657	-		Echvi_3682	0.66	-0.2
4,385,695	+		Echvi_3682	0.74	+1.6
4,385,755	+		Echvi_3682	0.87	+1.3
4,385,762	-		Echvi_3682	0.88	-1.3
4,385,768	+		Echvi_3682	0.90	-0.6
4,385,768	+		Echvi_3682	0.90	+0.0
4,385,808	+				-0.9
4,385,810	+				+1.3
4,386,054	+		Echvi_3683	0.52	-0.7
4,386,054	+		Echvi_3683	0.52	+0.0
4,386,055	-		Echvi_3683	0.53	-2.3
4,386,055	-		Echvi_3683	0.53	-0.7
4,386,120	+		Echvi_3683	0.72	-0.6
4,386,121	-		Echvi_3683	0.72	+0.4
4,386,139	+		Echvi_3683	0.77	+0.0
4,386,140	-		Echvi_3683	0.77	-1.5
4,386,140	-		Echvi_3683	0.77	-0.7
4,386,180	-		Echvi_3683	0.89	-0.7
4,386,359	+				-1.4
4,386,370	-				+0.1
4,386,444	+				-0.4
4,386,445	-				+0.0
4,386,449	-				-1.4
4,386,501	+				+0.9
4,386,502	-				-1.3
4,386,502	-				-0.2
4,386,507	+				-0.6
4,386,508	-				-1.0
4,386,530	-				+0.5
4,386,530	-				-0.0
4,386,592	-				-1.2
4,386,675	+				+0.5
4,386,678	+				-0.2
4,386,678	+				-0.3
4,386,678	+				+0.5
4,386,678	+				-0.6
4,386,678	+				-0.7
4,386,678	+				-1.6
4,386,679	-				+0.5
4,386,679	-				+0.6
4,386,679	-				-1.4
4,386,681	+				-0.7
4,386,681	+				-0.3
4,386,682	-				-0.2
4,386,682	-				+1.3
4,386,695	+				-0.1
4,386,696	-				+0.0
4,386,748	+		Echvi_3684	0.11	-1.0
4,386,790	-		Echvi_3684	0.12	-0.2
4,386,790	-		Echvi_3684	0.12	-0.4