Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3571

Experiment: m.b. D-Cycloserine 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.016 mg/ml
4,229,574	-				+0.6
4,229,655	-				-0.1
4,229,655	-				-1.1
4,229,683	+				-2.0
4,229,688	+		Echvi_3570	0.10	-0.2
4,229,688	+		Echvi_3570	0.10	-0.2
4,229,689	-		Echvi_3570	0.11	+0.5
4,229,689	-		Echvi_3570	0.11	-0.3
4,229,689	-		Echvi_3570	0.11	+0.2
4,229,699	+		Echvi_3570	0.12	+1.0
4,229,699	+		Echvi_3570	0.12	+0.7
4,229,699	+		Echvi_3570	0.12	-0.1
4,229,700	-		Echvi_3570	0.12	-1.4
4,229,700	-		Echvi_3570	0.12	+0.3
4,229,700	-		Echvi_3570	0.12	+0.8
4,229,702	-		Echvi_3570	0.12	+0.2
4,229,723	+		Echvi_3570	0.16	-0.0
4,229,724	-		Echvi_3570	0.16	+1.0
4,229,724	-		Echvi_3570	0.16	+0.7
4,229,724	-		Echvi_3570	0.16	+2.1
4,229,724	-		Echvi_3570	0.16	+0.0
4,229,724	-		Echvi_3570	0.16	-0.0
4,229,724	-		Echvi_3570	0.16	+0.8
4,229,727	+		Echvi_3570	0.16	-0.0
4,229,727	+		Echvi_3570	0.16	+0.8
4,229,727	+		Echvi_3570	0.16	+0.4
4,229,727	+		Echvi_3570	0.16	+0.6
4,229,727	+		Echvi_3570	0.16	+1.2
4,229,728	-		Echvi_3570	0.16	+0.6
4,229,728	-		Echvi_3570	0.16	-0.8
4,229,728	-		Echvi_3570	0.16	-1.2
4,229,732	+		Echvi_3570	0.17	-0.4
4,229,732	+		Echvi_3570	0.17	+0.2
4,229,732	+		Echvi_3570	0.17	+0.4
4,229,732	+		Echvi_3570	0.17	-2.3
4,229,733	-		Echvi_3570	0.17	+0.2
4,229,733	-		Echvi_3570	0.17	+0.5
4,229,734	+		Echvi_3570	0.17	+0.6
4,229,734	+		Echvi_3570	0.17	-0.2
4,229,734	+		Echvi_3570	0.17	+0.0
4,229,734	+		Echvi_3570	0.17	+0.9
4,229,773	-		Echvi_3570	0.23	+0.4
4,229,906	-		Echvi_3570	0.43	-0.0
4,229,949	-		Echvi_3570	0.49	-1.1
4,229,949	-		Echvi_3570	0.49	-1.2
4,229,949	-		Echvi_3570	0.49	+0.1
4,229,970	-		Echvi_3570	0.52	-0.1
4,229,976	+		Echvi_3570	0.53	-0.3
4,229,976	+		Echvi_3570	0.53	-0.7
4,229,989	+		Echvi_3570	0.55	+1.2
4,230,021	+		Echvi_3570	0.60	-0.4
4,230,226	-				-2.1
4,230,226	-				-0.2
4,230,233	-				+0.6
4,230,233	-				-0.7
4,230,340	-				-0.4
4,230,379	-				+0.4
4,230,451	+				+0.2
4,230,451	+				-0.5
4,230,452	-				+0.7
4,230,490	+				+1.4
4,230,491	-				+0.8
4,230,497	-				+2.6
4,230,497	-				+1.0
4,230,516	+				-0.2
4,230,517	-				+0.3
4,230,517	-				-0.9
4,230,565	+				+0.4
4,230,568	+				-0.3
4,230,576	+				-0.0
4,230,616	+				-0.8
4,230,650	+				-0.8
4,230,650	+				-0.7
4,230,650	+				-1.5
4,230,657	-				-0.4
4,230,736	+		Echvi_3571	0.14	-1.8
4,230,804	+		Echvi_3571	0.20	+1.4
4,230,839	-		Echvi_3571	0.22	-0.7
4,230,901	+		Echvi_3571	0.28	-0.3
4,230,942	-		Echvi_3571	0.31	-1.2
4,231,085	-		Echvi_3571	0.43	-0.2
4,231,112	+		Echvi_3571	0.45	-1.6
4,231,113	-		Echvi_3571	0.45	-1.9
4,231,114	+		Echvi_3571	0.45	-1.6
4,231,114	+		Echvi_3571	0.45	+1.0
4,231,165	+		Echvi_3571	0.49	-2.8
4,231,166	-		Echvi_3571	0.49	-0.9
4,231,169	-		Echvi_3571	0.50	-0.1
4,231,194	+		Echvi_3571	0.52	+0.1
4,231,194	+		Echvi_3571	0.52	-1.8
4,231,212	+		Echvi_3571	0.53	+0.1
4,231,234	+		Echvi_3571	0.55	-0.2
4,231,235	-		Echvi_3571	0.55	-1.0
4,231,250	+		Echvi_3571	0.56	-1.0
4,231,256	+		Echvi_3571	0.57	+0.3
4,231,256	+		Echvi_3571	0.57	+1.6
4,231,257	-		Echvi_3571	0.57	-1.6
4,231,259	-		Echvi_3571	0.57	-1.4
4,231,277	+		Echvi_3571	0.59	-1.5
4,231,277	+		Echvi_3571	0.59	+0.6
4,231,277	+		Echvi_3571	0.59	-1.1
4,231,277	+		Echvi_3571	0.59	-1.7
4,231,277	+		Echvi_3571	0.59	-0.9
4,231,278	-		Echvi_3571	0.59	-1.1
4,231,284	-		Echvi_3571	0.59	+1.6
4,231,284	-		Echvi_3571	0.59	+0.7
4,231,323	-		Echvi_3571	0.62	-0.8
4,231,323	-		Echvi_3571	0.62	+1.2
4,231,323	-		Echvi_3571	0.62	+0.7
4,231,323	-		Echvi_3571	0.62	+1.0
4,231,352	-		Echvi_3571	0.65	-0.9
4,231,434	+		Echvi_3571	0.72	-0.7
4,231,435	-		Echvi_3571	0.72	-1.0
4,231,435	-		Echvi_3571	0.72	-1.6
4,231,538	+		Echvi_3571	0.80	-0.4
4,231,548	-		Echvi_3571	0.81	-1.2
4,231,550	+		Echvi_3571	0.81	-0.5
4,231,577	+		Echvi_3571	0.83	-0.6
4,231,587	-		Echvi_3571	0.84	-1.1
4,231,703	+				-0.1
4,231,791	-				-0.1
4,231,791	-				+0.0
4,231,883	-				+0.1