Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3415

Experiment: m.b. D-Cycloserine 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.016 mg/ml
4,039,764	-				+0.2
4,039,764	-				+0.3
4,039,784	+				-0.6
4,039,784	+				-1.0
4,039,784	+				+0.9
4,039,784	+				+0.1
4,039,784	+				-0.1
4,039,784	+				-0.1
4,039,785	-				-0.5
4,039,785	-				-1.1
4,039,785	-				+1.0
4,039,785	-				+0.0
4,039,785	-				-0.4
4,039,792	+				+0.1
4,039,803	+				+0.3
4,039,803	+				-0.2
4,039,804	-				+0.3
4,039,804	-				-0.4
4,039,864	-		Echvi_3413	0.13	-0.3
4,039,866	+		Echvi_3413	0.13	+0.6
4,039,867	-		Echvi_3413	0.13	-0.3
4,039,922	+		Echvi_3413	0.24	-0.2
4,039,923	-		Echvi_3413	0.24	+0.5
4,039,923	-		Echvi_3413	0.24	-0.8
4,040,005	+		Echvi_3413	0.40	-1.8
4,040,006	-		Echvi_3413	0.40	+0.3
4,040,010	+		Echvi_3413	0.41	-0.2
4,040,015	+		Echvi_3413	0.42	+0.1
4,040,016	-		Echvi_3413	0.42	-0.9
4,040,016	-		Echvi_3413	0.42	-0.1
4,040,020	-		Echvi_3413	0.43	-0.2
4,040,020	-		Echvi_3413	0.43	-0.5
4,040,058	+		Echvi_3413	0.50	+0.2
4,040,058	+		Echvi_3413	0.50	-0.4
4,040,058	+		Echvi_3413	0.50	+0.8
4,040,058	+		Echvi_3413	0.50	-0.0
4,040,059	-		Echvi_3413	0.51	-0.5
4,040,059	-		Echvi_3413	0.51	-0.4
4,040,059	-		Echvi_3413	0.51	+0.3
4,040,202	-		Echvi_3413	0.79	+0.7
4,040,326	+				+0.4
4,040,409	+		Echvi_3414	0.32	-0.3
4,040,418	+		Echvi_3414	0.35	-0.4
4,040,419	-		Echvi_3414	0.35	+0.6
4,040,430	+		Echvi_3414	0.39	-0.1
4,040,431	-		Echvi_3414	0.39	+1.3
4,040,454	-		Echvi_3414	0.47	-0.0
4,040,496	-		Echvi_3414	0.60	+0.4
4,040,509	-		Echvi_3414	0.65	-1.0
4,040,537	+		Echvi_3414	0.74	-0.6
4,040,538	-		Echvi_3414	0.74	+0.2
4,040,556	-		Echvi_3414	0.80	-1.4
4,040,556	-		Echvi_3414	0.80	-0.7
4,040,556	-		Echvi_3414	0.80	+0.9
4,040,559	+		Echvi_3414	0.81	+0.6
4,040,559	+		Echvi_3414	0.81	+1.6
4,040,560	-		Echvi_3414	0.81	-0.9
4,040,586	-				+0.3
4,040,601	-				-0.1
4,040,857	+		Echvi_3415	0.30	+0.4
4,040,858	-		Echvi_3415	0.30	-0.4
4,040,858	-		Echvi_3415	0.30	-1.3
4,040,858	-		Echvi_3415	0.30	+0.2
4,040,860	-		Echvi_3415	0.30	-0.1
4,040,860	-		Echvi_3415	0.30	-3.0
4,040,869	+		Echvi_3415	0.32	+2.6
4,040,870	-		Echvi_3415	0.32	-0.3
4,040,870	-		Echvi_3415	0.32	-0.4
4,040,870	-		Echvi_3415	0.32	-0.4
4,040,923	+		Echvi_3415	0.42	+1.1
4,040,924	-		Echvi_3415	0.42	+0.6
4,040,924	-		Echvi_3415	0.42	+0.4
4,040,924	-		Echvi_3415	0.42	+0.1
4,040,953	-		Echvi_3415	0.48	-0.4
4,041,015	-		Echvi_3415	0.59	-0.3
4,041,045	+		Echvi_3415	0.65	+0.2
4,041,087	+		Echvi_3415	0.73	+0.0
4,041,101	-		Echvi_3415	0.76	+1.3
4,041,118	-		Echvi_3415	0.79	-0.5
4,041,147	+		Echvi_3415	0.84	-1.0
4,041,147	+		Echvi_3415	0.84	-1.0
4,041,147	+		Echvi_3415	0.84	+0.8
4,041,147	+		Echvi_3415	0.84	+0.3
4,041,147	+		Echvi_3415	0.84	-0.5
4,041,148	-		Echvi_3415	0.85	-0.5
4,041,148	-		Echvi_3415	0.85	-1.6
4,041,148	-		Echvi_3415	0.85	-0.6
4,041,148	-		Echvi_3415	0.85	-0.4
4,041,149	+		Echvi_3415	0.85	-0.9
4,041,152	+		Echvi_3415	0.85	-0.5
4,041,158	+		Echvi_3415	0.87	+1.1
4,041,159	-		Echvi_3415	0.87	+0.3
4,041,162	+		Echvi_3415	0.87	+0.2
4,041,163	-		Echvi_3415	0.88	+1.0
4,041,164	+		Echvi_3415	0.88	+0.9
4,041,190	+				-0.4
4,041,190	+				+2.2
4,041,191	-				-0.8
4,041,191	-				-0.4
4,041,192	+				+1.1
4,041,192	+				-2.0
4,041,202	+				+1.0
4,041,202	+				+0.0
4,041,202	+				-0.9
4,041,269	+				-1.3
4,041,277	-				-1.0
4,041,300	+				-0.4
4,041,398	+				-0.0
4,041,399	-				+0.8
4,041,403	-				-0.4
4,041,403	-				-1.8
4,041,414	+				+0.6
4,041,414	+				-0.6
4,041,432	+				-0.5
4,041,436	-				+0.3
4,041,579	-		Echvi_3416	0.10	+0.6
4,041,579	-		Echvi_3416	0.10	-0.9
4,041,603	+		Echvi_3416	0.13	+1.0
4,041,654	+		Echvi_3416	0.17	-1.0
4,041,655	-		Echvi_3416	0.17	+0.3
4,041,667	+		Echvi_3416	0.18	-0.7
4,041,668	-		Echvi_3416	0.18	+0.1
4,041,704	-		Echvi_3416	0.22	-0.4
4,041,743	+		Echvi_3416	0.25	-1.0
4,041,750	-		Echvi_3416	0.26	+0.1
4,041,804	-		Echvi_3416	0.31	-1.1
4,041,824	+		Echvi_3416	0.33	+0.3
4,041,824	+		Echvi_3416	0.33	-1.2
4,041,825	-		Echvi_3416	0.33	-0.1
4,041,843	-		Echvi_3416	0.35	+0.2
4,041,852	-		Echvi_3416	0.35	-0.2
4,041,897	-		Echvi_3416	0.39	+0.3
4,041,951	+		Echvi_3416	0.44	-0.2
4,041,951	+		Echvi_3416	0.44	+0.4
4,041,951	+		Echvi_3416	0.44	-0.2
4,041,994	+		Echvi_3416	0.48	-0.0
4,041,994	+		Echvi_3416	0.48	+0.7
4,041,995	-		Echvi_3416	0.48	-0.4
4,041,995	-		Echvi_3416	0.48	-1.0
4,042,103	+		Echvi_3416	0.58	+0.6
4,042,125	-		Echvi_3416	0.60	+0.1
4,042,125	-		Echvi_3416	0.60	-0.8
4,042,125	-		Echvi_3416	0.60	+0.2
4,042,125	-		Echvi_3416	0.60	+0.0
4,042,138	-		Echvi_3416	0.62	-0.7
4,042,148	+		Echvi_3416	0.62	+0.7
4,042,149	-		Echvi_3416	0.63	+0.7
4,042,151	+		Echvi_3416	0.63	-1.4
4,042,152	-				-0.0
4,042,152	-		Echvi_3416	0.63	+3.1
4,042,152	-		Echvi_3416	0.63	-0.0
4,042,152	-		Echvi_3416	0.63	-0.7
4,042,203	+		Echvi_3416	0.67	-0.1
4,042,204	-		Echvi_3416	0.68	-0.7
4,042,204	-		Echvi_3416	0.68	-0.3