Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3402

Experiment: m.b. D-Cycloserine 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.016 mg/ml
4,021,501	+		Echvi_3400	0.76	-0.9
4,021,542	-		Echvi_3400	0.79	+1.1
4,021,542	-		Echvi_3400	0.79	+0.6
4,021,542	-		Echvi_3400	0.79	-0.7
4,021,561	-		Echvi_3400	0.80	-0.3
4,021,584	+		Echvi_3400	0.82	+0.6
4,021,584	+		Echvi_3400	0.82	-0.2
4,021,591	+		Echvi_3400	0.82	+0.7
4,021,601	+		Echvi_3400	0.83	+0.5
4,021,601	+		Echvi_3400	0.83	-0.0
4,021,700	+		Echvi_3400	0.90	-0.4
4,021,828	-				+0.4
4,021,828	-				+0.4
4,021,845	-				+0.7
4,021,860	+				+0.6
4,021,861	-				-0.2
4,021,874	+				+2.4
4,021,875	-				-0.4
4,021,875	-				-0.1
4,021,892	+				-0.4
4,021,892	+				-0.2
4,021,932	+				-0.9
4,021,932	+				-0.6
4,021,933	-				-0.7
4,022,122	-		Echvi_3401	0.34	+0.9
4,022,270	-		Echvi_3401	0.75	+0.1
4,022,272	-		Echvi_3401	0.75	-0.9
4,022,537	-		Echvi_3402	0.46	-0.8
4,022,539	-		Echvi_3402	0.47	+0.0
4,022,539	-		Echvi_3402	0.47	-0.3
4,022,544	-		Echvi_3402	0.50	-1.5
4,022,623	+				-0.1
4,022,627	+				+0.9
4,022,646	+				-1.0
4,022,650	+				+0.6
4,022,650	+				+0.4
4,022,650	+				+1.8
4,022,740	+				+0.3
4,022,740	+				+0.1
4,022,740	+				-0.1
4,022,743	+				-0.3
4,022,743	+				-0.1
4,022,744	-				+0.6
4,022,744	-				-0.3
4,022,769	+				+0.8
4,022,769	+				+0.0
4,022,769	+				+0.2
4,022,769	+				-0.3
4,022,770	-				+0.1
4,022,772	+				-1.3
4,022,772	+				-0.8
4,022,773	-				-0.4
4,022,773	-				-0.3
4,022,814	+				+0.6
4,022,825	+				-2.4
4,022,834	+				+0.4
4,022,834	+				-0.0
4,022,835	-				+0.4
4,022,835	-				+0.3
4,022,835	-				-1.6
4,022,835	-				+0.0
4,022,835	-				-1.0
4,022,837	+				+0.2
4,022,837	+				-0.8
4,022,838	-				+1.6
4,022,849	+				+1.1
4,022,858	+				+1.8
4,022,858	+				+1.1
4,022,866	+				-0.1
4,022,941	+				-1.7
4,022,941	+				-0.2
4,022,942	-				+0.8
4,022,942	-				-0.0
4,022,942	-				+0.3
4,022,944	-				+0.7
4,023,017	+				+0.4
4,023,018	-				+0.2
4,023,059	+				-0.2
4,023,059	+				-0.5
4,023,059	+				+0.7
4,023,060	-				+0.4
4,023,118	+				-0.0
4,023,118	+				+1.4
4,023,119	-				+1.1
4,023,133	-				-0.5
4,023,133	-				+0.6
4,023,133	-				-1.1
4,023,151	-				-0.4
4,023,190	+				+0.3
4,023,191	-				+0.0
4,023,191	-				-0.3
4,023,196	-				+0.4
4,023,196	-				-0.0
4,023,312	+		Echvi_3403	0.11	+1.6
4,023,313	-		Echvi_3403	0.11	+0.0
4,023,313	-		Echvi_3403	0.11	-0.0
4,023,316	-		Echvi_3403	0.11	+0.6
4,023,316	-		Echvi_3403	0.11	+0.0
4,023,316	-		Echvi_3403	0.11	-1.6
4,023,316	-		Echvi_3403	0.11	-0.3
4,023,316	-		Echvi_3403	0.11	-0.8
4,023,316	-		Echvi_3403	0.11	+0.6
4,023,331	-		Echvi_3403	0.12	+0.6
4,023,331	-		Echvi_3403	0.12	-0.3
4,023,333	+		Echvi_3403	0.12	-1.3
4,023,333	+		Echvi_3403	0.12	+1.6
4,023,333	+		Echvi_3403	0.12	-0.2
4,023,333	+		Echvi_3403	0.12	-0.8
4,023,393	-		Echvi_3403	0.13	+1.1
4,023,410	+		Echvi_3403	0.13	-0.6
4,023,410	+		Echvi_3403	0.13	-1.4
4,023,410	+		Echvi_3403	0.13	-0.3
4,023,411	-		Echvi_3403	0.13	-0.6
4,023,411	-		Echvi_3403	0.13	+0.6
4,023,412	+		Echvi_3403	0.13	+0.4
4,023,412	+		Echvi_3403	0.13	-0.3
4,023,413	-		Echvi_3403	0.13	+0.6
4,023,413	-		Echvi_3403	0.13	-0.4
4,023,413	-		Echvi_3403	0.13	+1.6
4,023,413	-		Echvi_3403	0.13	+0.3
4,023,413	-		Echvi_3403	0.13	-2.8
4,023,413	-		Echvi_3403	0.13	-0.2
4,023,414	+		Echvi_3403	0.13	+0.2
4,023,415	-		Echvi_3403	0.13	+1.2
4,023,415	-		Echvi_3403	0.13	+0.2
4,023,415	-		Echvi_3403	0.13	-0.4
4,023,415	-		Echvi_3403	0.13	-0.8
4,023,421	-		Echvi_3403	0.14	-1.9
4,023,502	+		Echvi_3403	0.15	+0.3
4,023,502	+		Echvi_3403	0.15	-1.4
4,023,502	+		Echvi_3403	0.15	-0.3
4,023,502	+		Echvi_3403	0.15	-1.3
4,023,503	-		Echvi_3403	0.15	+0.0
4,023,503	-		Echvi_3403	0.15	+0.1
4,023,503	-		Echvi_3403	0.15	+1.4
4,023,504	+		Echvi_3403	0.15	-0.6
4,023,504	+		Echvi_3403	0.15	+0.1
4,023,505	-		Echvi_3403	0.15	-0.6
4,023,505	-		Echvi_3403	0.15	-0.6
4,023,547	-		Echvi_3403	0.16	+1.4
4,023,558	+		Echvi_3403	0.17	+1.3
4,023,559	-		Echvi_3403	0.17	-0.1
4,023,559	-		Echvi_3403	0.17	+0.4
4,023,559	-		Echvi_3403	0.17	-1.4