Experiment: m.b. D-Cycloserine 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2504 and Echvi_2505 are separated by 37 nucleotides Echvi_2505 and Echvi_2506 are separated by 74 nucleotides Echvi_2506 and Echvi_2507 are separated by 183 nucleotides
Echvi_2504: Echvi_2504 - Anthranilate/para-aminobenzoate synthases component I, at 2,976,557 to 2,977,966
_2504
Echvi_2505: Echvi_2505 - S23 ribosomal protein., at 2,978,004 to 2,978,384
_2505
Echvi_2506: Echvi_2506 - glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase, at 2,978,459 to 2,979,028
_2506
Echvi_2507: Echvi_2507 - anthranilate phosphoribosyltransferase, at 2,979,212 to 2,980,228
_2507
Position (kb)
2978
2979
2980 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2978.080 kb on + strand, within Echvi_2505 at 2978.162 kb on - strand, within Echvi_2505 at 2978.162 kb on - strand, within Echvi_2505 at 2978.178 kb on + strand, within Echvi_2505 at 2978.199 kb on - strand, within Echvi_2505 at 2978.210 kb on + strand, within Echvi_2505 at 2978.215 kb on - strand, within Echvi_2505 at 2978.261 kb on - strand, within Echvi_2505 at 2978.293 kb on - strand, within Echvi_2505 at 2978.453 kb on + strand at 2978.454 kb on - strand at 2978.455 kb on + strand at 2978.466 kb on + strand at 2978.472 kb on + strand at 2978.512 kb on + strand at 2978.666 kb on + strand, within Echvi_2506 at 2978.843 kb on + strand, within Echvi_2506 at 2978.892 kb on + strand, within Echvi_2506 at 2978.920 kb on + strand, within Echvi_2506 at 2978.943 kb on - strand, within Echvi_2506 at 2979.018 kb on + strand at 2979.019 kb on - strand at 2979.031 kb on - strand at 2979.053 kb on - strand at 2979.063 kb on - strand at 2979.089 kb on + strand at 2979.115 kb on + strand at 2979.475 kb on + strand, within Echvi_2507 at 2979.736 kb on + strand, within Echvi_2507 at 2979.875 kb on + strand, within Echvi_2507
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.016 mg/ml remove 2,978,080 + Echvi_2505 0.20 -0.2 2,978,162 - Echvi_2505 0.41 -0.2 2,978,162 - Echvi_2505 0.41 -0.9 2,978,178 + Echvi_2505 0.46 -0.8 2,978,199 - Echvi_2505 0.51 -0.1 2,978,210 + Echvi_2505 0.54 -0.3 2,978,215 - Echvi_2505 0.55 +0.5 2,978,261 - Echvi_2505 0.67 -1.1 2,978,293 - Echvi_2505 0.76 -0.4 2,978,453 + -0.9 2,978,454 - -0.9 2,978,455 + -0.1 2,978,466 + +0.7 2,978,472 + -1.5 2,978,512 + -0.3 2,978,666 + Echvi_2506 0.36 -1.0 2,978,843 + Echvi_2506 0.67 +1.1 2,978,892 + Echvi_2506 0.76 -0.3 2,978,920 + Echvi_2506 0.81 -0.6 2,978,943 - Echvi_2506 0.85 -1.1 2,979,018 + -1.0 2,979,019 - -1.0 2,979,031 - -1.1 2,979,053 - -0.5 2,979,063 - -0.3 2,979,089 + -0.5 2,979,115 + +1.7 2,979,475 + Echvi_2507 0.26 -1.3 2,979,736 + Echvi_2507 0.52 -2.8 2,979,875 + Echvi_2507 0.65 +1.0
Or see this region's nucleotide sequence