Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1813

Experiment: m.b. D-Cycloserine 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.016 mg/ml
2,131,267	-				-0.5
2,131,267	-				-1.0
2,131,324	+				+0.2
2,131,324	+				-1.4
2,131,382	+				+0.9
2,131,403	+		Echvi_1812	0.13	-3.0
2,131,404	-		Echvi_1812	0.13	-0.8
2,131,404	-		Echvi_1812	0.13	+0.9
2,131,468	+		Echvi_1812	0.25	+0.6
2,131,730	-		Echvi_1812	0.70	+1.4
2,131,902	+				-0.3
2,131,910	+				+0.6
2,131,911	-				-0.2
2,131,911	-				-1.0
2,131,914	+				+0.3
2,131,915	-				+0.3
2,131,935	+				+1.1
2,131,936	-				-1.1
2,131,994	+				-1.1
2,132,116	+		Echvi_1813	0.30	-1.6
2,132,153	-		Echvi_1813	0.38	+0.1
2,132,153	-		Echvi_1813	0.38	-1.6
2,132,440	-				+0.2
2,132,440	-				+0.6
2,132,492	+				+0.1
2,132,512	+				+0.5
2,132,513	-				-0.6
2,132,513	-				+1.4
2,132,596	+		Echvi_1814	0.16	+0.7
2,132,620	+		Echvi_1814	0.19	+0.7
2,132,621	-		Echvi_1814	0.20	-0.5
2,132,665	+		Echvi_1814	0.26	-0.6
2,132,670	+		Echvi_1814	0.26	-0.2
2,132,670	+		Echvi_1814	0.26	-0.2
2,132,670	+		Echvi_1814	0.26	+0.5
2,132,754	+		Echvi_1814	0.38	+0.0
2,132,755	-		Echvi_1814	0.38	-1.1
2,132,828	+		Echvi_1814	0.48	-0.7
2,132,846	-		Echvi_1814	0.51	-0.7
2,132,846	-		Echvi_1814	0.51	-1.3
2,132,961	+		Echvi_1814	0.67	+0.8
2,132,961	+		Echvi_1814	0.67	+0.8
2,132,961	+		Echvi_1814	0.67	-0.6
2,132,961	+		Echvi_1814	0.67	+2.1
2,133,015	+		Echvi_1814	0.74	-1.1
2,133,016	-		Echvi_1814	0.74	-0.5
2,133,016	-		Echvi_1814	0.74	+1.3
2,133,032	+		Echvi_1814	0.77	+0.6
2,133,032	+		Echvi_1814	0.77	-0.9
2,133,033	-		Echvi_1814	0.77	+0.1
2,133,119	-		Echvi_1814	0.89	-1.3
2,133,145	+				+0.9
2,133,146	-				+0.5
2,133,146	-				-0.9
2,133,146	-				-1.8
2,133,151	+				-0.2
2,133,152	-				-0.0
2,133,162	-				-0.6
2,133,243	-				+0.3
2,133,258	-				+0.1
2,133,370	+		Echvi_1815	0.14	+0.3
2,133,370	+		Echvi_1815	0.14	-0.4
2,133,370	+		Echvi_1815	0.14	+1.3
2,133,373	-		Echvi_1815	0.14	-0.2
2,133,373	-		Echvi_1815	0.14	-1.0