Experiment: m.b. D-Cycloserine 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1794 and Echvi_1795 are separated by 824 nucleotides Echvi_1795 and Echvi_1796 are separated by 549 nucleotides
Echvi_1794: Echvi_1794 - 5S, at 2,110,171 to 2,110,282
_1794
Echvi_1795: Echvi_1795 - hypothetical protein, at 2,111,107 to 2,111,424
_1795
Echvi_1796: Echvi_1796 - ATPase components of ABC transporters with duplicated ATPase domains, at 2,111,974 to 2,113,884
_1796
Position (kb)
2111
2112 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2110.130 kb on - strand at 2110.172 kb on - strand at 2110.625 kb on + strand at 2110.625 kb on + strand at 2110.647 kb on + strand at 2110.731 kb on + strand at 2110.732 kb on - strand at 2110.768 kb on + strand at 2110.768 kb on + strand at 2110.942 kb on + strand at 2110.942 kb on + strand at 2110.942 kb on + strand at 2110.944 kb on + strand at 2110.944 kb on + strand at 2110.972 kb on - strand at 2111.068 kb on - strand at 2111.075 kb on - strand at 2111.075 kb on - strand at 2111.075 kb on - strand at 2111.075 kb on - strand at 2111.075 kb on - strand at 2111.075 kb on - strand at 2111.078 kb on - strand at 2111.078 kb on - strand at 2111.079 kb on + strand at 2111.116 kb on - strand at 2111.181 kb on + strand, within Echvi_1795 at 2111.181 kb on + strand, within Echvi_1795 at 2111.183 kb on + strand, within Echvi_1795 at 2111.187 kb on + strand, within Echvi_1795 at 2111.188 kb on - strand, within Echvi_1795 at 2111.188 kb on - strand, within Echvi_1795 at 2111.188 kb on - strand, within Echvi_1795 at 2111.248 kb on - strand, within Echvi_1795 at 2111.256 kb on + strand, within Echvi_1795 at 2111.257 kb on - strand, within Echvi_1795 at 2111.281 kb on + strand, within Echvi_1795 at 2111.282 kb on - strand, within Echvi_1795 at 2111.388 kb on - strand, within Echvi_1795 at 2111.416 kb on - strand at 2111.418 kb on + strand at 2111.418 kb on + strand at 2111.423 kb on - strand at 2111.471 kb on + strand at 2111.483 kb on + strand at 2111.510 kb on - strand at 2111.511 kb on + strand at 2111.512 kb on - strand at 2111.568 kb on - strand at 2111.580 kb on - strand at 2111.582 kb on - strand at 2111.582 kb on - strand at 2111.582 kb on - strand at 2111.582 kb on - strand at 2111.585 kb on + strand at 2111.592 kb on + strand at 2111.592 kb on + strand at 2111.592 kb on + strand at 2111.593 kb on - strand at 2111.593 kb on - strand at 2111.594 kb on + strand at 2111.594 kb on + strand at 2111.594 kb on + strand at 2111.594 kb on + strand at 2111.595 kb on - strand at 2111.595 kb on - strand at 2111.595 kb on - strand at 2111.595 kb on - strand at 2111.595 kb on - strand at 2111.642 kb on - strand at 2111.642 kb on - strand at 2111.645 kb on + strand at 2111.646 kb on - strand at 2111.654 kb on + strand at 2111.654 kb on + strand at 2111.671 kb on - strand at 2111.706 kb on - strand at 2111.716 kb on + strand at 2111.717 kb on - strand at 2111.723 kb on + strand at 2111.750 kb on - strand at 2111.769 kb on + strand at 2111.769 kb on + strand at 2111.769 kb on + strand at 2111.793 kb on - strand at 2111.835 kb on + strand at 2111.851 kb on - strand at 2111.874 kb on + strand at 2111.909 kb on + strand at 2111.922 kb on + strand at 2111.938 kb on + strand at 2111.987 kb on - strand at 2112.089 kb on + strand at 2112.090 kb on - strand at 2112.090 kb on - strand at 2112.164 kb on + strand at 2112.187 kb on + strand, within Echvi_1796 at 2112.187 kb on + strand, within Echvi_1796 at 2112.188 kb on - strand, within Echvi_1796 at 2112.221 kb on + strand, within Echvi_1796 at 2112.221 kb on + strand, within Echvi_1796 at 2112.221 kb on + strand, within Echvi_1796 at 2112.221 kb on + strand, within Echvi_1796 at 2112.221 kb on + strand, within Echvi_1796 at 2112.222 kb on - strand, within Echvi_1796 at 2112.222 kb on - strand, within Echvi_1796 at 2112.225 kb on + strand, within Echvi_1796 at 2112.225 kb on + strand at 2112.226 kb on - strand, within Echvi_1796 at 2112.239 kb on + strand, within Echvi_1796 at 2112.284 kb on - strand, within Echvi_1796 at 2112.343 kb on - strand, within Echvi_1796 at 2112.343 kb on - strand, within Echvi_1796 at 2112.344 kb on + strand, within Echvi_1796 at 2112.345 kb on - strand, within Echvi_1796 at 2112.414 kb on - strand, within Echvi_1796 at 2112.414 kb on - strand, within Echvi_1796
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.016 mg/ml remove 2,110,130 - +0.5 2,110,172 - -1.0 2,110,625 + -1.0 2,110,625 + -0.6 2,110,647 + +0.4 2,110,731 + -1.2 2,110,732 - -0.7 2,110,768 + +0.3 2,110,768 + -0.2 2,110,942 + +0.6 2,110,942 + +0.1 2,110,942 + -2.3 2,110,944 + +0.1 2,110,944 + +0.1 2,110,972 - -1.2 2,111,068 - +1.6 2,111,075 - -1.5 2,111,075 - +0.1 2,111,075 - +0.2 2,111,075 - +0.0 2,111,075 - -1.2 2,111,075 - -0.1 2,111,078 - +0.1 2,111,078 - -0.4 2,111,079 + +0.7 2,111,116 - -0.1 2,111,181 + Echvi_1795 0.23 -0.7 2,111,181 + Echvi_1795 0.23 -1.9 2,111,183 + Echvi_1795 0.24 +0.5 2,111,187 + Echvi_1795 0.25 -2.1 2,111,188 - Echvi_1795 0.25 -2.5 2,111,188 - Echvi_1795 0.25 -1.6 2,111,188 - Echvi_1795 0.25 +1.8 2,111,248 - Echvi_1795 0.44 +0.1 2,111,256 + Echvi_1795 0.47 -0.2 2,111,257 - Echvi_1795 0.47 -0.9 2,111,281 + Echvi_1795 0.55 -0.8 2,111,282 - Echvi_1795 0.55 -0.4 2,111,388 - Echvi_1795 0.88 -0.2 2,111,416 - -0.2 2,111,418 + +0.7 2,111,418 + -0.4 2,111,423 - +0.3 2,111,471 + -0.2 2,111,483 + -0.0 2,111,510 - +1.7 2,111,511 + -0.1 2,111,512 - -0.5 2,111,568 - +0.3 2,111,580 - -0.1 2,111,582 - +0.4 2,111,582 - -0.5 2,111,582 - +0.2 2,111,582 - +3.8 2,111,585 + +0.0 2,111,592 + +0.2 2,111,592 + -0.2 2,111,592 + -0.7 2,111,593 - -0.1 2,111,593 - +0.9 2,111,594 + +0.4 2,111,594 + -0.4 2,111,594 + +0.7 2,111,594 + -0.4 2,111,595 - +1.3 2,111,595 - +1.6 2,111,595 - +0.6 2,111,595 - +0.4 2,111,595 - +0.1 2,111,642 - +0.0 2,111,642 - +0.3 2,111,645 + +1.0 2,111,646 - +0.1 2,111,654 + -0.7 2,111,654 + -0.6 2,111,671 - -0.0 2,111,706 - +0.1 2,111,716 + -0.7 2,111,717 - +0.1 2,111,723 + +0.6 2,111,750 - -0.1 2,111,769 + +1.0 2,111,769 + +0.8 2,111,769 + -1.2 2,111,793 - +0.6 2,111,835 + +0.2 2,111,851 - +1.1 2,111,874 + -0.8 2,111,909 + +0.3 2,111,922 + -0.7 2,111,938 + -0.5 2,111,987 - -0.6 2,112,089 + +0.4 2,112,090 - -0.4 2,112,090 - -1.0 2,112,164 + -0.4 2,112,187 + Echvi_1796 0.11 +2.2 2,112,187 + Echvi_1796 0.11 -1.4 2,112,188 - Echvi_1796 0.11 -0.8 2,112,221 + Echvi_1796 0.13 -0.5 2,112,221 + Echvi_1796 0.13 -0.3 2,112,221 + Echvi_1796 0.13 -1.0 2,112,221 + Echvi_1796 0.13 -1.0 2,112,221 + Echvi_1796 0.13 +0.8 2,112,222 - Echvi_1796 0.13 +0.3 2,112,222 - Echvi_1796 0.13 -0.1 2,112,225 + Echvi_1796 0.13 -1.5 2,112,225 + +0.8 2,112,226 - Echvi_1796 0.13 +0.3 2,112,239 + Echvi_1796 0.14 -0.1 2,112,284 - Echvi_1796 0.16 +0.0 2,112,343 - Echvi_1796 0.19 +0.8 2,112,343 - Echvi_1796 0.19 +1.4 2,112,344 + Echvi_1796 0.19 -0.4 2,112,345 - Echvi_1796 0.19 -0.0 2,112,414 - Echvi_1796 0.23 -0.3 2,112,414 - Echvi_1796 0.23 -1.4
Or see this region's nucleotide sequence