Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1493

Experiment: m.b. D-Cycloserine 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.016 mg/ml
1,711,460	+		Echvi_1491	0.70	+0.7
1,711,463	-		Echvi_1491	0.71	+0.4
1,711,563	-				+0.7
1,711,570	-				-0.6
1,711,709	+		Echvi_1492	0.20	+0.9
1,711,821	-		Echvi_1492	0.52	+0.6
1,711,822	+		Echvi_1492	0.52	+1.1
1,711,822	+		Echvi_1492	0.52	-0.7
1,711,892	+		Echvi_1492	0.72	+0.8
1,711,988	+				-1.2
1,712,013	+				+0.2
1,712,014	-				-2.3
1,712,072	+				+0.3
1,712,072	+				-1.0
1,712,072	+				+1.9
1,712,073	-				-0.9
1,712,073	-				-0.6
1,712,073	-				-0.2
1,712,078	+				+2.3
1,712,079	-				+0.1
1,712,079	-				+0.3
1,712,079	-				-0.5
1,712,099	+				+0.1
1,712,099	+				-0.3
1,712,101	+				-0.1
1,712,101	+				+0.1
1,712,111	-				-0.6
1,712,147	+				+0.0
1,712,157	-				-0.1
1,712,293	+				-1.7
1,712,294	-				-0.1
1,712,387	+				-0.1
1,712,559	+		Echvi_1493	0.63	-0.3
1,712,561	+		Echvi_1493	0.65	-0.9
1,712,561	+		Echvi_1493	0.65	-0.8
1,712,561	+		Echvi_1493	0.65	-1.3
1,712,628	-				+1.1
1,712,672	-				-1.3
1,712,672	-				+1.0
1,712,691	-				-0.1
1,712,693	-				-0.9
1,712,724	+				+0.3
1,712,724	+				+0.3
1,712,759	+				-0.1
1,712,880	+				-1.2
1,712,881	-				+0.7
1,712,882	+				-1.1
1,712,892	+				+0.0
1,712,892	+				-0.6
1,712,892	+				+0.7
1,712,892	+				+1.3
1,712,892	+				+0.8
1,712,892	+				-1.0
1,712,892	+				+0.5
1,712,893	-				-0.1
1,712,893	-				+0.9
1,712,893	-				-1.0
1,712,893	-				-1.8
1,712,893	-				-0.3
1,712,893	-				-0.3
1,712,893	-				-0.5
1,712,893	-				+0.2
1,712,893	-				-0.8
1,712,900	+				+0.2
1,712,900	+				-0.7
1,712,900	+				+0.0
1,712,900	+				-0.1
1,712,900	+				-0.6
1,712,900	+				-1.5
1,712,901	-				-0.8
1,712,901	-				-0.0
1,712,901	-				+0.5
1,712,901	-				-0.8
1,712,914	+				-0.9
1,712,915	-				-0.9
1,712,944	-				-0.1
1,712,993	+				-0.0
1,712,993	+				+0.6
1,712,994	-				-0.1
1,712,994	-				-0.7
1,712,998	+				-0.1
1,712,999	-				-0.4
1,713,024	-				+0.2
1,713,065	-				+0.2
1,713,065	-				+0.5
1,713,116	+				-0.1
1,713,116	+				+0.8
1,713,116	+				+1.2
1,713,117	-				-0.4
1,713,117	-				-0.2
1,713,225	+				+0.4
1,713,311	+				-0.4
1,713,358	+				-0.9
1,713,358	+				+0.6
1,713,359	-				-0.4
1,713,391	+				+0.4
1,713,391	+				-0.6
1,713,429	-				-0.7
1,713,437	-		Echvi_1494	0.10	+0.3
1,713,437	-		Echvi_1494	0.10	-0.9
1,713,446	-		Echvi_1494	0.11	+1.1
1,713,446	-		Echvi_1494	0.11	-1.6
1,713,446	-		Echvi_1494	0.11	+0.5
1,713,446	-		Echvi_1494	0.11	+0.5
1,713,446	-		Echvi_1494	0.11	-1.3
1,713,465	+		Echvi_1494	0.11	+1.7
1,713,466	-		Echvi_1494	0.11	+0.8
1,713,467	+		Echvi_1494	0.11	+1.9
1,713,527	+		Echvi_1494	0.14	+1.9
1,713,528	-		Echvi_1494	0.14	-1.2
1,713,530	+		Echvi_1494	0.14	-0.7
1,713,531	-		Echvi_1494	0.14	-0.7
1,713,531	-		Echvi_1494	0.14	-0.3
1,713,531	-		Echvi_1494	0.14	-0.5
1,713,580	+		Echvi_1494	0.16	+0.9
1,713,581	-		Echvi_1494	0.16	+0.3
1,713,593	+		Echvi_1494	0.17	+0.8
1,713,610	-		Echvi_1494	0.18	-0.9