Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1490

Experiment: m.b. D-Cycloserine 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.016 mg/ml
1,707,773	+		Echvi_1489	0.24	-0.2
1,707,796	+		Echvi_1489	0.26	+0.1
1,707,796	+		Echvi_1489	0.26	+0.8
1,707,797	-		Echvi_1489	0.26	-0.4
1,707,797	-		Echvi_1489	0.26	+0.7
1,707,797	-		Echvi_1489	0.26	-0.6
1,707,806	-		Echvi_1489	0.27	+0.6
1,707,821	+		Echvi_1489	0.28	+0.5
1,707,821	+		Echvi_1489	0.28	+0.2
1,707,899	+		Echvi_1489	0.35	+0.4
1,707,900	-		Echvi_1489	0.35	+1.6
1,707,923	+		Echvi_1489	0.37	-0.6
1,707,923	+		Echvi_1489	0.37	+0.0
1,707,924	-		Echvi_1489	0.37	+0.1
1,707,924	-		Echvi_1489	0.37	+0.5
1,707,924	-		Echvi_1489	0.37	+0.9
1,708,046	+		Echvi_1489	0.48	-0.8
1,708,047	-		Echvi_1489	0.49	+0.2
1,708,131	-		Echvi_1489	0.56	-0.0
1,708,178	+		Echvi_1489	0.60	+0.6
1,708,290	+		Echvi_1489	0.70	+0.5
1,708,291	-		Echvi_1489	0.71	-0.2
1,708,291	-		Echvi_1489	0.71	-0.1
1,708,308	+		Echvi_1489	0.72	-0.5
1,708,371	-		Echvi_1489	0.78	-0.4
1,708,421	+		Echvi_1489	0.82	+0.6
1,708,487	+		Echvi_1489	0.88	-0.9
1,708,487	+		Echvi_1489	0.88	+0.2
1,708,530	+				+0.3
1,708,531	-				+0.5
1,708,578	-				+0.6
1,708,578	-				-0.4
1,708,648	+				+0.1
1,708,648	+				+0.6
1,708,648	+				-2.2
1,708,651	-				+1.9
1,708,651	-				-0.4
1,708,651	-				+1.9
1,708,651	-				-0.3
1,708,722	+				-0.6
1,708,723	-				-0.8
1,708,732	-				-3.0
1,708,811	+				-2.7
1,708,830	+				-1.9
1,708,830	+				-2.7
1,708,831	-				-1.7
1,708,831	-				-0.4
1,708,894	+				-2.6
1,708,894	+				-0.1
1,708,931	+				-2.2
1,708,934	-				-2.6
1,709,038	+		Echvi_1490	0.13	-0.7
1,709,050	+		Echvi_1490	0.13	-0.6
1,709,050	+		Echvi_1490	0.13	-2.5
1,709,050	+		Echvi_1490	0.13	-0.7
1,709,050	+		Echvi_1490	0.13	-3.6
1,709,228	+		Echvi_1490	0.21	-3.7
1,709,255	+		Echvi_1490	0.22	-2.8
1,709,255	+		Echvi_1490	0.22	-3.7
1,709,256	-		Echvi_1490	0.22	-5.0
1,709,343	+		Echvi_1490	0.25	-0.1
1,709,343	+		Echvi_1490	0.25	-2.7
1,709,344	-		Echvi_1490	0.25	-2.3
1,709,344	-		Echvi_1490	0.25	-1.1
1,709,345	+		Echvi_1490	0.25	-4.4
1,709,345	+		Echvi_1490	0.25	-3.1
1,709,345	+		Echvi_1490	0.25	-3.2
1,709,345	+		Echvi_1490	0.25	-1.4
1,709,345	+		Echvi_1490	0.25	-2.1
1,709,346	-		Echvi_1490	0.25	-1.9
1,709,346	-		Echvi_1490	0.25	-3.5
1,709,346	-		Echvi_1490	0.25	-2.1
1,709,346	-		Echvi_1490	0.25	-3.4
1,709,346	-		Echvi_1490	0.25	-3.0
1,709,453	+		Echvi_1490	0.30	-3.2
1,709,453	+		Echvi_1490	0.30	-2.7
1,709,453	+		Echvi_1490	0.30	-1.9
1,709,485	-		Echvi_1490	0.31	-3.1
1,709,515	+		Echvi_1490	0.32	-2.6
1,709,516	-		Echvi_1490	0.32	-2.5
1,709,517	+		Echvi_1490	0.32	-2.8
1,709,539	-		Echvi_1490	0.33	-3.4
1,709,539	-		Echvi_1490	0.33	-1.2
1,709,632	+		Echvi_1490	0.37	-3.6
1,709,632	+		Echvi_1490	0.37	-2.0
1,709,634	+		Echvi_1490	0.37	-1.9
1,709,649	+		Echvi_1490	0.38	-0.9
1,709,681	+		Echvi_1490	0.39	-2.1
1,709,723	+		Echvi_1490	0.41	-2.1
1,709,760	+		Echvi_1490	0.42	-2.9
1,709,837	+		Echvi_1490	0.45	-0.1
1,709,882	+		Echvi_1490	0.47	-2.6
1,709,882	+		Echvi_1490	0.47	-2.8
1,709,882	+		Echvi_1490	0.47	-3.7
1,709,882	+				-0.4
1,709,882	+		Echvi_1490	0.47	-2.5
1,709,883	-		Echvi_1490	0.47	-2.3
1,709,883	-		Echvi_1490	0.47	+1.5
1,709,883	-		Echvi_1490	0.47	-2.3
1,709,883	-		Echvi_1490	0.47	-2.2
1,709,883	-		Echvi_1490	0.47	-2.6
1,709,901	+		Echvi_1490	0.48	-1.1
1,709,901	+		Echvi_1490	0.48	-2.5
1,709,901	+		Echvi_1490	0.48	-2.3
1,709,901	+		Echvi_1490	0.48	-1.3
1,709,901	+		Echvi_1490	0.48	-1.9
1,709,902	-		Echvi_1490	0.48	-3.1
1,709,902	-		Echvi_1490	0.48	-2.7
1,709,902	-		Echvi_1490	0.48	-1.6
1,709,902	-		Echvi_1490	0.48	-2.4
1,709,902	-		Echvi_1490	0.48	-0.9
1,709,902	-		Echvi_1490	0.48	-1.3
1,709,902	-		Echvi_1490	0.48	-1.3
1,709,910	-		Echvi_1490	0.48	-1.3
1,709,948	+		Echvi_1490	0.50	-2.8
1,710,002	+		Echvi_1490	0.52	-2.6
1,710,003	-		Echvi_1490	0.52	-2.5
1,710,003	-		Echvi_1490	0.52	-1.0
1,710,003	-		Echvi_1490	0.52	-1.9
1,710,160	-		Echvi_1490	0.58	-2.9
1,710,209	+		Echvi_1490	0.60	-1.7
1,710,209	+		Echvi_1490	0.60	-0.9
1,710,281	+		Echvi_1490	0.63	-1.1
1,710,302	-		Echvi_1490	0.64	-1.1
1,710,383	-		Echvi_1490	0.67	-2.2
1,710,383	-		Echvi_1490	0.67	-0.9
1,710,416	+		Echvi_1490	0.69	-2.7
1,710,417	-		Echvi_1490	0.69	-2.6
1,710,417	-		Echvi_1490	0.69	-2.9
1,710,421	+		Echvi_1490	0.69	-4.4
1,710,421	+		Echvi_1490	0.69	+0.9
1,710,422	-		Echvi_1490	0.69	-2.9
1,710,422	-		Echvi_1490	0.69	-1.3
1,710,422	-		Echvi_1490	0.69	-2.5
1,710,422	-		Echvi_1490	0.69	-2.6
1,710,423	+		Echvi_1490	0.69	-1.7
1,710,423	+		Echvi_1490	0.69	-0.9
1,710,424	-		Echvi_1490	0.69	-3.1
1,710,424	-		Echvi_1490	0.69	-1.4
1,710,674	+		Echvi_1490	0.79	-1.8
1,710,754	-		Echvi_1490	0.83	-2.9
1,710,842	-		Echvi_1490	0.86	-0.7
1,710,896	+		Echvi_1490	0.88	-0.8
1,710,983	+				-1.7
1,710,984	-				-3.0
1,710,984	-				-2.9
1,711,011	+				-1.9
1,711,072	-				-3.2
1,711,072	-				-1.4
1,711,074	-				-3.9
1,711,097	-				-2.9
1,711,178	+				-0.7
1,711,179	-				-0.5
1,711,179	-				-1.8
1,711,358	+		Echvi_1491	0.40	-0.5
1,711,397	-		Echvi_1491	0.51	-0.9
1,711,449	+		Echvi_1491	0.67	+0.1
1,711,460	+		Echvi_1491	0.70	+0.7
1,711,463	-		Echvi_1491	0.71	+0.4
1,711,563	-				+0.7
1,711,570	-				-0.6
1,711,709	+		Echvi_1492	0.20	+0.9
1,711,821	-		Echvi_1492	0.52	+0.6
1,711,822	+		Echvi_1492	0.52	+1.1
1,711,822	+		Echvi_1492	0.52	-0.7
1,711,892	+		Echvi_1492	0.72	+0.8
1,711,988	+				-1.2
1,712,013	+				+0.2
1,712,014	-				-2.3
1,712,072	+				+0.3
1,712,072	+				-1.0
1,712,072	+				+1.9
1,712,073	-				-0.9
1,712,073	-				-0.6
1,712,073	-				-0.2
1,712,078	+				+2.3
1,712,079	-				+0.1
1,712,079	-				+0.3
1,712,079	-				-0.5
1,712,099	+				+0.1
1,712,099	+				-0.3
1,712,101	+				-0.1
1,712,101	+				+0.1
1,712,111	-				-0.6
1,712,147	+				+0.0
1,712,157	-				-0.1