Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1308

Experiment: m.b. D-Cycloserine 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.016 mg/ml
1,504,105	+		Echvi_1307	0.48	+0.8
1,504,112	+		Echvi_1307	0.49	+1.2
1,504,117	+		Echvi_1307	0.49	+2.0
1,504,142	+		Echvi_1307	0.51	+0.8
1,504,142	+		Echvi_1307	0.51	+0.3
1,504,143	-		Echvi_1307	0.51	+0.2
1,504,147	+		Echvi_1307	0.51	+0.1
1,504,148	-		Echvi_1307	0.51	-0.4
1,504,148	-		Echvi_1307	0.51	+1.2
1,504,220	+		Echvi_1307	0.55	+0.7
1,504,221	-		Echvi_1307	0.56	-0.9
1,504,224	+		Echvi_1307	0.56	+0.8
1,504,224	+		Echvi_1307	0.56	-1.1
1,504,225	-		Echvi_1307	0.56	+3.0
1,504,225	-		Echvi_1307	0.56	-0.6
1,504,264	+		Echvi_1307	0.58	+0.3
1,504,268	+		Echvi_1307	0.58	-1.6
1,504,268	+		Echvi_1307	0.58	-0.2
1,504,268	+		Echvi_1307	0.58	-0.2
1,504,268	+		Echvi_1307	0.58	+0.2
1,504,269	-		Echvi_1307	0.58	+1.0
1,504,269	-		Echvi_1307	0.58	-0.5
1,504,269	-		Echvi_1307	0.58	+1.5
1,504,269	-		Echvi_1307	0.58	-1.6
1,504,269	-		Echvi_1307	0.58	-1.3
1,504,307	+		Echvi_1307	0.61	+1.5
1,504,322	+		Echvi_1307	0.62	+0.1
1,504,337	+		Echvi_1307	0.63	-1.1
1,504,381	+		Echvi_1307	0.65	+1.5
1,504,381	+		Echvi_1307	0.65	-2.0
1,504,381	+		Echvi_1307	0.65	-0.5
1,504,381	+		Echvi_1307	0.65	-0.0
1,504,382	-		Echvi_1307	0.65	+0.4
1,504,385	+		Echvi_1307	0.66	-0.4
1,504,385	+		Echvi_1307	0.66	+0.3
1,504,387	+		Echvi_1307	0.66	-0.1
1,504,400	-		Echvi_1307	0.67	-0.8
1,504,408	+		Echvi_1307	0.67	+1.2
1,504,408	+		Echvi_1307	0.67	-1.6
1,504,409	-		Echvi_1307	0.67	+1.7
1,504,469	+		Echvi_1307	0.71	-0.5
1,504,531	+		Echvi_1307	0.75	+2.7
1,504,531	+		Echvi_1307	0.75	-0.0
1,504,532	-		Echvi_1307	0.75	+3.0
1,504,532	-		Echvi_1307	0.75	-1.7
1,504,616	+		Echvi_1307	0.80	+0.2
1,504,617	-		Echvi_1307	0.80	+1.0
1,504,617	-		Echvi_1307	0.80	-0.9
1,504,617	-		Echvi_1307	0.80	-1.1
1,504,647	-		Echvi_1307	0.82	+0.4
1,504,648	+		Echvi_1307	0.82	-0.5
1,504,753	+		Echvi_1307	0.88	-0.0
1,504,773	-		Echvi_1307	0.90	-0.4
1,504,774	+		Echvi_1307	0.90	+0.4
1,504,774	+		Echvi_1307	0.90	-0.5
1,504,774	+		Echvi_1307	0.90	+2.0
1,504,779	-		Echvi_1307	0.90	+1.1
1,504,784	-				-0.5
1,504,805	+				+0.4
1,504,805	+				-0.6
1,504,882	-				+0.5
1,504,890	+				-0.7
1,504,890	+				+2.0
1,504,890	+				+1.3
1,504,890	+				-0.6
1,504,890	+				+0.6
1,504,890	+				-0.3
1,504,891	-				-0.2
1,504,891	-				+0.4
1,504,891	-				+0.2
1,504,891	-				+0.7
1,504,891	-				+0.6
1,504,891	-				+0.5
1,504,896	+				+0.9
1,505,005	+				+2.5
1,505,044	+				+0.2
1,505,060	+				+0.8
1,505,111	-		Echvi_1308	0.28	-1.2
1,505,121	-		Echvi_1308	0.35	-0.6
1,505,123	-		Echvi_1308	0.36	-0.7
1,505,194	+		Echvi_1308	0.81	-0.3
1,505,194	+		Echvi_1308	0.81	+0.5
1,505,194	+		Echvi_1308	0.81	-0.8
1,505,196	+		Echvi_1308	0.83	-0.6
1,505,196	+		Echvi_1308	0.83	-0.5
1,505,247	+				+1.3
1,505,247	+				-1.0
1,505,283	-				-0.3
1,505,283	-				+0.8
1,505,295	-				+1.0
1,505,363	+				+0.6
1,505,363	+				-0.2
1,505,497	+				+0.5
1,505,533	-				-0.3
1,505,600	-				-0.1
1,505,605	-				+0.1
1,505,691	+				-0.4
1,505,692	-				-0.6
1,505,692	-				-0.9
1,505,692	-				-1.0
1,505,733	+				+2.0
1,505,770	+				+0.9
1,505,776	+				-0.5
1,505,776	+				+0.1
1,505,776	+				+0.1
1,505,788	+				-0.7
1,505,814	+				-1.8
1,505,815	-				-0.9
1,505,815	-				+1.5
1,505,815	-				+2.0
1,505,815	-				-0.4
1,505,840	-				+2.0
1,505,843	+				-0.4
1,505,843	+				+1.4
1,505,844	-				-0.6
1,505,844	-				+0.4
1,505,896	+				+2.0
1,505,896	+				+2.4
1,505,896	+				+0.4
1,505,897	-				+0.4
1,505,897	-				-0.6
1,505,910	+				+0.2
1,505,942	-				-1.3
1,505,999	-		Echvi_1309	0.10	-0.3
1,505,999	-		Echvi_1309	0.10	-1.3
1,506,137	+		Echvi_1309	0.15	+0.3
1,506,137	+		Echvi_1309	0.15	-0.4
1,506,167	+		Echvi_1309	0.16	-0.2
1,506,176	-		Echvi_1309	0.16	+0.3
1,506,176	-		Echvi_1309	0.16	-0.4
1,506,176	-		Echvi_1309	0.16	+0.7
1,506,202	+		Echvi_1309	0.17	+0.2
1,506,202	+		Echvi_1309	0.17	-0.0
1,506,203	-		Echvi_1309	0.17	+1.4
1,506,203	-		Echvi_1309	0.17	-0.0
1,506,203	-		Echvi_1309	0.17	+0.4