Experiment: m.b. D-Cycloserine 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0770 and Echvi_0771 overlap by 29 nucleotides Echvi_0771 and Echvi_0772 are separated by 141 nucleotides
Echvi_0770: Echvi_0770 - dihydrolipoamide dehydrogenase, at 866,750 to 868,234
_0770
Echvi_0771: Echvi_0771 - S23 ribosomal protein., at 868,206 to 868,559
_0771
Echvi_0772: Echvi_0772 - 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component), at 868,701 to 870,275
_0772
Position (kb) 868
869 Strain fitness (log2 ratio) -2
-1
0
1
2 at 868.180 kb on - strand at 868.180 kb on - strand at 868.187 kb on - strand at 868.187 kb on - strand at 868.194 kb on - strand at 868.294 kb on - strand, within Echvi_0771 at 868.298 kb on - strand, within Echvi_0771 at 868.298 kb on - strand, within Echvi_0771 at 868.303 kb on - strand, within Echvi_0771 at 868.303 kb on - strand, within Echvi_0771 at 868.321 kb on - strand, within Echvi_0771 at 868.363 kb on - strand, within Echvi_0771 at 868.413 kb on - strand, within Echvi_0771 at 868.453 kb on - strand, within Echvi_0771 at 868.494 kb on - strand, within Echvi_0771 at 868.494 kb on - strand, within Echvi_0771 at 868.494 kb on - strand, within Echvi_0771 at 868.497 kb on - strand, within Echvi_0771 at 868.497 kb on - strand, within Echvi_0771 at 868.497 kb on - strand, within Echvi_0771 at 868.497 kb on - strand, within Echvi_0771 at 868.499 kb on - strand, within Echvi_0771 at 868.499 kb on - strand, within Echvi_0771 at 868.513 kb on - strand, within Echvi_0771 at 868.519 kb on - strand, within Echvi_0771 at 868.563 kb on - strand at 868.609 kb on - strand at 868.645 kb on + strand at 868.662 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.016 mg/ml remove 868,180 - +1.3 868,180 - -0.2 868,187 - +0.5 868,187 - -0.9 868,194 - -0.8 868,294 - Echvi_0771 0.25 -1.9 868,298 - Echvi_0771 0.26 -0.4 868,298 - Echvi_0771 0.26 -2.0 868,303 - Echvi_0771 0.27 -0.4 868,303 - Echvi_0771 0.27 +0.5 868,321 - Echvi_0771 0.32 -2.0 868,363 - Echvi_0771 0.44 -0.0 868,413 - Echvi_0771 0.58 -0.7 868,453 - Echvi_0771 0.70 -0.9 868,494 - Echvi_0771 0.81 +0.1 868,494 - Echvi_0771 0.81 +0.1 868,494 - Echvi_0771 0.81 -0.6 868,497 - Echvi_0771 0.82 -0.9 868,497 - Echvi_0771 0.82 +2.0 868,497 - Echvi_0771 0.82 -1.5 868,497 - Echvi_0771 0.82 -0.9 868,499 - Echvi_0771 0.83 +2.0 868,499 - Echvi_0771 0.83 -0.0 868,513 - Echvi_0771 0.87 -0.6 868,519 - Echvi_0771 0.88 -0.6 868,563 - +0.1 868,609 - +0.0 868,645 + -2.4 868,662 - +1.5
Or see this region's nucleotide sequence