Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0089

Experiment: m.b. D-Cycloserine 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.016 mg/ml
88,935	-				+1.0
88,943	-				+0.5
89,007	+				+0.3
89,007	+				-0.5
89,007	+				-0.5
89,007	+				+0.8
89,007	+				-0.2
89,007	+				+0.4
89,007	+				-0.1
89,008	-				-0.8
89,066	-		Echvi_0089	0.16	-1.0
89,071	+		Echvi_0089	0.17	-0.3
89,071	+		Echvi_0089	0.17	+0.8
89,072	-		Echvi_0089	0.17	-0.0
89,072	-		Echvi_0089	0.17	-0.1
89,154	+		Echvi_0089	0.38	+1.8
89,155	-		Echvi_0089	0.38	+0.6
89,155	-		Echvi_0089	0.38	-0.5
89,155	-		Echvi_0089	0.38	-1.5
89,445	+				-0.5
89,450	+				-1.2
89,450	+				+0.5
89,451	-				+1.0
89,454	+				-0.4
89,508	+				-0.5
89,575	+				-0.4
89,575	+				-1.4
89,578	+				-0.2
89,591	-				+2.0
89,597	+				+0.4
89,597	+				-1.1
89,684	-		Echvi_0090	0.26	+0.8
89,761	+		Echvi_0090	0.50	-0.6
89,762	-		Echvi_0090	0.50	-0.1
89,811	+		Echvi_0090	0.65	+1.2
89,944	-				+0.4
89,944	-				-0.0
89,946	-				-0.1
89,949	-				+1.6
89,951	+				-0.4
89,952	-				-0.1
89,975	-				-0.5
90,084	+				+0.1
90,085	-				-0.3
90,085	-				+0.2
90,111	+				-1.7
90,111	+				+0.1
90,111	+				-1.5
90,111	+				-0.3
90,112	-				-0.1
90,112	-				+0.8
90,134	-				+0.2
90,134	-				-0.1
90,134	-				+1.0
90,216	-				-0.1
90,246	+				+1.0
90,246	+				+0.9
90,368	+		Echvi_0091	0.11	-0.1
90,369	-		Echvi_0091	0.11	+0.2