Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0003

Experiment: m.b. D-Cycloserine 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.016 mg/ml
1,712	+				-1.4
1,713	-				+0.8
1,723	-				+0.7
1,765	-				-1.8
1,818	+		Echvi_0002	0.11	+2.1
1,818	+		Echvi_0002	0.11	-0.7
1,818	+		Echvi_0002	0.11	+0.8
1,819	-		Echvi_0002	0.11	+0.4
1,821	+		Echvi_0002	0.11	-1.2
1,822	-		Echvi_0002	0.12	-1.2
1,824	-		Echvi_0002	0.12	+1.6
1,824	-		Echvi_0002	0.12	-1.4
2,091	+		Echvi_0002	0.46	-1.5
2,092	-		Echvi_0002	0.46	-0.1
2,268	-		Echvi_0002	0.69	-0.6
2,328	+		Echvi_0002	0.77	-0.1
2,329	-		Echvi_0002	0.77	+0.2
2,330	+		Echvi_0002	0.77	-1.7
2,330	+		Echvi_0002	0.77	+1.8
2,331	-		Echvi_0002	0.77	+0.8
2,342	+		Echvi_0002	0.79	+0.5
2,344	+		Echvi_0002	0.79	-1.3
2,344	+		Echvi_0002	0.79	+0.5
2,345	-		Echvi_0002	0.79	-1.2
2,345	-		Echvi_0002	0.79	-2.2
2,353	+		Echvi_0002	0.80	+0.1
2,367	+		Echvi_0002	0.82	-0.3
2,368	-		Echvi_0002	0.82	-0.3
2,370	+		Echvi_0002	0.82	-1.0
2,370	+		Echvi_0002	0.82	+0.7
2,405	-		Echvi_0002	0.87	-1.1
2,457	+				+0.8
2,485	+				-0.0
2,486	-				+0.5
2,487	+				-0.8
2,508	+				+0.7
2,509	-				-0.2
2,509	-				+1.6
2,512	+				+0.1
2,512	+				-2.8
2,512	+				+1.1
2,544	+				-1.0
2,544	+				+0.3
2,545	-				+1.6
2,545	-				-0.7
2,678	+		Echvi_0003	0.16	+0.8
2,767	+		Echvi_0003	0.24	-0.2
2,768	-		Echvi_0003	0.25	+0.7
3,134	+		Echvi_0003	0.61	-0.8
3,161	+		Echvi_0003	0.64	-0.5
3,161	+		Echvi_0003	0.64	+0.5
3,162	-		Echvi_0003	0.64	-1.0
3,232	-		Echvi_0003	0.71	-0.8
3,382	+		Echvi_0003	0.86	-0.2
3,383	-		Echvi_0003	0.86	-0.2
3,383	-		Echvi_0003	0.86	-1.9
3,563	-				-0.0
3,567	+				-0.0
3,616	+		Echvi_0004	0.16	+0.1
3,695	-		Echvi_0004	0.36	-0.3
3,695	-		Echvi_0004	0.36	+1.0
3,704	+		Echvi_0004	0.38	-0.7
3,705	-		Echvi_0004	0.38	-0.6
3,719	+		Echvi_0004	0.42	+0.2
3,785	-		Echvi_0004	0.58	-0.2
3,795	-		Echvi_0004	0.60	+0.6
3,876	-		Echvi_0004	0.80	-0.7
3,876	-		Echvi_0004	0.80	-1.8
3,925	-				+0.1
3,931	+				+1.8
3,931	+				+0.3
3,931	+				+0.3
3,932	-				-0.5
3,935	-				+0.9
3,936	+				-1.2
4,013	+				-0.2
4,014	-				-0.3
4,017	-				+0.1
4,049	+				+0.4