Strain Fitness in Escherichia coli BW25113 around b0777
Experiment: A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | A22 0.04 mg/ml |
---|---|---|---|---|---|
remove | |||||
809,993 | + | bioF | b0776 | 0.34 | +1.7 |
809,993 | + | bioF | b0776 | 0.34 | -0.7 |
810,237 | + | bioF | b0776 | 0.55 | +0.7 |
810,237 | + | bioF | b0776 | 0.55 | -1.5 |
810,359 | + | bioF | b0776 | 0.65 | -0.1 |
810,362 | - | bioF | b0776 | 0.66 | +0.3 |
810,393 | - | bioF | b0776 | 0.68 | +0.4 |
810,414 | + | bioF | b0776 | 0.70 | +0.4 |
810,492 | + | bioF | b0776 | 0.77 | +0.7 |
810,492 | + | bioF | b0776 | 0.77 | +0.7 |
810,673 | + | +0.7 | |||
810,673 | - | -0.3 | |||
810,729 | + | +0.5 | |||
810,791 | + | -0.7 | |||
810,833 | + | bioC | b0777 | 0.12 | +0.8 |
810,971 | + | bioC | b0777 | 0.30 | +0.2 |
811,122 | + | bioC | b0777 | 0.50 | +0.6 |
811,122 | + | bioC | b0777 | 0.50 | -1.3 |
811,122 | + | bioC | b0777 | 0.50 | -1.3 |
811,122 | + | bioC | b0777 | 0.50 | +0.0 |
811,326 | + | bioC | b0777 | 0.77 | -0.3 |
811,326 | + | bioC | b0777 | 0.77 | +2.5 |
811,326 | + | bioC | b0777 | 0.77 | +0.4 |
811,366 | - | bioC | b0777 | 0.82 | -0.1 |
811,423 | + | bioC | b0777 | 0.90 | -1.9 |
811,423 | + | bioC | b0777 | 0.90 | -0.7 |
811,431 | - | +1.3 | |||
811,446 | - | -0.0 | |||
811,446 | - | +1.0 | |||
811,464 | - | +0.9 | |||
811,559 | + | +0.7 | |||
811,672 | + | bioD | b0778 | 0.26 | -1.9 |
811,720 | - | bioD | b0778 | 0.33 | +0.3 |
811,757 | + | bioD | b0778 | 0.39 | +0.4 |
812,000 | + | bioD | b0778 | 0.75 | +0.7 |
812,005 | - | bioD | b0778 | 0.76 | -1.9 |
812,005 | - | bioD | b0778 | 0.76 | +2.0 |
812,051 | + | bioD | b0778 | 0.82 | -0.3 |
812,051 | + | bioD | b0778 | 0.82 | -0.9 |
812,061 | - | bioD | b0778 | 0.84 | +0.7 |
812,295 | - | -0.7 | |||
812,353 | - | -0.3 |
Or see this region's nucleotide sequence