Experiment: m.b. Lomefloxacin 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2239 and Echvi_2240 are separated by 13 nucleotides Echvi_2240 and Echvi_2241 are separated by 27 nucleotides
Echvi_2239: Echvi_2239 - hypothetical protein, at 2,662,541 to 2,663,308
_2239
Echvi_2240: Echvi_2240 - Glycosyltransferase family 28 C-terminal domain., at 2,663,322 to 2,663,929
_2240
Echvi_2241: Echvi_2241 - ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain, at 2,663,957 to 2,665,945
_2241
Position (kb)
2663
2664 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2662.335 kb on - strand at 2662.335 kb on - strand at 2662.519 kb on + strand at 2662.582 kb on + strand at 2662.582 kb on + strand at 2662.636 kb on + strand, within Echvi_2239 at 2662.648 kb on - strand, within Echvi_2239 at 2662.648 kb on - strand, within Echvi_2239 at 2662.661 kb on - strand, within Echvi_2239 at 2662.722 kb on - strand, within Echvi_2239 at 2662.722 kb on - strand, within Echvi_2239 at 2662.758 kb on - strand, within Echvi_2239 at 2662.777 kb on - strand, within Echvi_2239 at 2662.777 kb on - strand, within Echvi_2239 at 2662.779 kb on + strand, within Echvi_2239 at 2662.855 kb on + strand, within Echvi_2239 at 2662.871 kb on + strand, within Echvi_2239 at 2662.871 kb on + strand, within Echvi_2239 at 2662.872 kb on - strand, within Echvi_2239 at 2662.872 kb on - strand, within Echvi_2239 at 2662.872 kb on - strand, within Echvi_2239 at 2662.878 kb on + strand, within Echvi_2239 at 2662.879 kb on - strand, within Echvi_2239 at 2662.879 kb on - strand, within Echvi_2239 at 2662.933 kb on - strand, within Echvi_2239 at 2662.933 kb on - strand, within Echvi_2239 at 2662.933 kb on - strand, within Echvi_2239 at 2662.933 kb on - strand, within Echvi_2239 at 2662.949 kb on + strand, within Echvi_2239 at 2662.950 kb on - strand, within Echvi_2239 at 2662.952 kb on - strand, within Echvi_2239 at 2662.953 kb on + strand, within Echvi_2239 at 2662.953 kb on + strand, within Echvi_2239 at 2662.953 kb on + strand, within Echvi_2239 at 2662.953 kb on + strand, within Echvi_2239 at 2662.954 kb on - strand, within Echvi_2239 at 2663.006 kb on - strand, within Echvi_2239 at 2663.011 kb on + strand, within Echvi_2239 at 2663.011 kb on + strand, within Echvi_2239 at 2663.011 kb on + strand, within Echvi_2239 at 2663.011 kb on + strand, within Echvi_2239 at 2663.011 kb on + strand, within Echvi_2239 at 2663.012 kb on - strand, within Echvi_2239 at 2663.012 kb on - strand, within Echvi_2239 at 2663.012 kb on - strand, within Echvi_2239 at 2663.012 kb on - strand, within Echvi_2239 at 2663.012 kb on - strand, within Echvi_2239 at 2663.012 kb on - strand, within Echvi_2239 at 2663.103 kb on + strand, within Echvi_2239 at 2663.131 kb on + strand, within Echvi_2239 at 2663.151 kb on - strand, within Echvi_2239 at 2663.151 kb on - strand, within Echvi_2239 at 2663.179 kb on - strand, within Echvi_2239 at 2663.183 kb on - strand, within Echvi_2239 at 2663.183 kb on - strand, within Echvi_2239 at 2663.201 kb on - strand, within Echvi_2239 at 2663.273 kb on - strand at 2663.304 kb on + strand at 2663.314 kb on + strand at 2663.315 kb on - strand at 2663.315 kb on - strand at 2663.357 kb on + strand at 2663.358 kb on - strand at 2663.358 kb on - strand at 2663.393 kb on + strand, within Echvi_2240 at 2663.483 kb on + strand, within Echvi_2240 at 2663.491 kb on + strand, within Echvi_2240 at 2663.491 kb on + strand, within Echvi_2240 at 2663.492 kb on - strand, within Echvi_2240 at 2663.495 kb on + strand, within Echvi_2240 at 2663.529 kb on - strand, within Echvi_2240 at 2663.562 kb on - strand, within Echvi_2240 at 2663.562 kb on - strand, within Echvi_2240 at 2663.605 kb on + strand, within Echvi_2240 at 2663.605 kb on + strand, within Echvi_2240 at 2663.606 kb on - strand, within Echvi_2240 at 2663.606 kb on - strand, within Echvi_2240 at 2663.606 kb on - strand, within Echvi_2240 at 2663.679 kb on - strand, within Echvi_2240 at 2663.679 kb on - strand, within Echvi_2240 at 2663.782 kb on + strand, within Echvi_2240 at 2663.782 kb on + strand, within Echvi_2240 at 2663.817 kb on + strand, within Echvi_2240 at 2663.817 kb on + strand, within Echvi_2240 at 2663.818 kb on - strand, within Echvi_2240 at 2663.837 kb on + strand, within Echvi_2240 at 2663.837 kb on + strand, within Echvi_2240 at 2663.872 kb on - strand at 2663.882 kb on - strand at 2663.894 kb on - strand at 2663.905 kb on - strand at 2663.905 kb on - strand at 2663.905 kb on - strand at 2663.969 kb on - strand at 2663.971 kb on + strand at 2663.972 kb on - strand at 2663.972 kb on - strand at 2663.972 kb on - strand at 2664.050 kb on + strand at 2664.053 kb on + strand at 2664.053 kb on + strand at 2664.053 kb on + strand at 2664.053 kb on + strand at 2664.053 kb on + strand at 2664.054 kb on - strand at 2664.054 kb on - strand at 2664.054 kb on - strand at 2664.064 kb on + strand at 2664.065 kb on - strand at 2664.065 kb on - strand at 2664.065 kb on - strand at 2664.065 kb on - strand at 2664.119 kb on - strand at 2664.119 kb on - strand at 2664.217 kb on - strand, within Echvi_2241 at 2664.264 kb on - strand, within Echvi_2241 at 2664.321 kb on - strand, within Echvi_2241 at 2664.400 kb on + strand, within Echvi_2241 at 2664.401 kb on - strand, within Echvi_2241 at 2664.433 kb on + strand, within Echvi_2241 at 2664.460 kb on + strand, within Echvi_2241 at 2664.460 kb on + strand, within Echvi_2241 at 2664.632 kb on + strand, within Echvi_2241 at 2664.634 kb on + strand, within Echvi_2241 at 2664.634 kb on + strand, within Echvi_2241 at 2664.634 kb on + strand, within Echvi_2241 at 2664.635 kb on - strand, within Echvi_2241 at 2664.636 kb on + strand, within Echvi_2241 at 2664.636 kb on + strand, within Echvi_2241 at 2664.636 kb on + strand, within Echvi_2241 at 2664.636 kb on + strand, within Echvi_2241 at 2664.636 kb on + strand, within Echvi_2241 at 2664.637 kb on - strand, within Echvi_2241 at 2664.637 kb on - strand, within Echvi_2241 at 2664.637 kb on - strand, within Echvi_2241 at 2664.637 kb on - strand, within Echvi_2241 at 2664.637 kb on - strand, within Echvi_2241 at 2664.637 kb on - strand, within Echvi_2241 at 2664.637 kb on - strand, within Echvi_2241 at 2664.637 kb on - strand, within Echvi_2241 at 2664.673 kb on + strand, within Echvi_2241 at 2664.673 kb on + strand, within Echvi_2241 at 2664.673 kb on + strand, within Echvi_2241 at 2664.673 kb on + strand, within Echvi_2241 at 2664.831 kb on + strand, within Echvi_2241 at 2664.831 kb on + strand, within Echvi_2241 at 2664.857 kb on + strand, within Echvi_2241 at 2664.858 kb on - strand, within Echvi_2241 at 2664.916 kb on + strand, within Echvi_2241 at 2664.917 kb on - strand, within Echvi_2241
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.025 mM remove 2,662,335 - +2.9 2,662,335 - -1.2 2,662,519 + +1.0 2,662,582 + +0.7 2,662,582 + +0.4 2,662,636 + Echvi_2239 0.12 +1.1 2,662,648 - Echvi_2239 0.14 -0.6 2,662,648 - Echvi_2239 0.14 +0.7 2,662,661 - Echvi_2239 0.16 -1.2 2,662,722 - Echvi_2239 0.24 -0.8 2,662,722 - Echvi_2239 0.24 +1.0 2,662,758 - Echvi_2239 0.28 -0.7 2,662,777 - Echvi_2239 0.31 -1.7 2,662,777 - Echvi_2239 0.31 -0.3 2,662,779 + Echvi_2239 0.31 +0.7 2,662,855 + Echvi_2239 0.41 -1.6 2,662,871 + Echvi_2239 0.43 +1.3 2,662,871 + Echvi_2239 0.43 +0.5 2,662,872 - Echvi_2239 0.43 -2.7 2,662,872 - Echvi_2239 0.43 -1.3 2,662,872 - Echvi_2239 0.43 -0.0 2,662,878 + Echvi_2239 0.44 -0.2 2,662,879 - Echvi_2239 0.44 -1.8 2,662,879 - Echvi_2239 0.44 -1.0 2,662,933 - Echvi_2239 0.51 -0.7 2,662,933 - Echvi_2239 0.51 -0.9 2,662,933 - Echvi_2239 0.51 +0.1 2,662,933 - Echvi_2239 0.51 -1.7 2,662,949 + Echvi_2239 0.53 +0.4 2,662,950 - Echvi_2239 0.53 +1.3 2,662,952 - Echvi_2239 0.54 -0.4 2,662,953 + Echvi_2239 0.54 +1.3 2,662,953 + Echvi_2239 0.54 +0.8 2,662,953 + Echvi_2239 0.54 +1.1 2,662,953 + Echvi_2239 0.54 +1.8 2,662,954 - Echvi_2239 0.54 +0.1 2,663,006 - Echvi_2239 0.61 +0.7 2,663,011 + Echvi_2239 0.61 -1.0 2,663,011 + Echvi_2239 0.61 -0.7 2,663,011 + Echvi_2239 0.61 +1.7 2,663,011 + Echvi_2239 0.61 +0.1 2,663,011 + Echvi_2239 0.61 -1.2 2,663,012 - Echvi_2239 0.61 -1.2 2,663,012 - Echvi_2239 0.61 -0.2 2,663,012 - Echvi_2239 0.61 +1.3 2,663,012 - Echvi_2239 0.61 -0.1 2,663,012 - Echvi_2239 0.61 -1.0 2,663,012 - Echvi_2239 0.61 +0.2 2,663,103 + Echvi_2239 0.73 -0.2 2,663,131 + Echvi_2239 0.77 +0.6 2,663,151 - Echvi_2239 0.79 -1.3 2,663,151 - Echvi_2239 0.79 +1.7 2,663,179 - Echvi_2239 0.83 -0.2 2,663,183 - Echvi_2239 0.84 +0.9 2,663,183 - Echvi_2239 0.84 -0.5 2,663,201 - Echvi_2239 0.86 -2.0 2,663,273 - -0.5 2,663,304 + +1.2 2,663,314 + -1.3 2,663,315 - -1.4 2,663,315 - -0.9 2,663,357 + +1.9 2,663,358 - +0.8 2,663,358 - +0.1 2,663,393 + Echvi_2240 0.12 +0.6 2,663,483 + Echvi_2240 0.26 +0.5 2,663,491 + Echvi_2240 0.28 +0.5 2,663,491 + Echvi_2240 0.28 -1.2 2,663,492 - Echvi_2240 0.28 -1.3 2,663,495 + Echvi_2240 0.28 +1.3 2,663,529 - Echvi_2240 0.34 -0.2 2,663,562 - Echvi_2240 0.39 +1.6 2,663,562 - Echvi_2240 0.39 -1.5 2,663,605 + Echvi_2240 0.47 +1.2 2,663,605 + Echvi_2240 0.47 +0.3 2,663,606 - Echvi_2240 0.47 +0.9 2,663,606 - Echvi_2240 0.47 +1.0 2,663,606 - Echvi_2240 0.47 +1.3 2,663,679 - Echvi_2240 0.59 -0.3 2,663,679 - Echvi_2240 0.59 +0.6 2,663,782 + Echvi_2240 0.76 -0.3 2,663,782 + Echvi_2240 0.76 +0.3 2,663,817 + Echvi_2240 0.81 -1.5 2,663,817 + Echvi_2240 0.81 +1.1 2,663,818 - Echvi_2240 0.82 -1.4 2,663,837 + Echvi_2240 0.85 -0.2 2,663,837 + Echvi_2240 0.85 +0.5 2,663,872 - +0.5 2,663,882 - -0.2 2,663,894 - -0.4 2,663,905 - -0.6 2,663,905 - -0.0 2,663,905 - -2.1 2,663,969 - -0.9 2,663,971 + -0.2 2,663,972 - -1.1 2,663,972 - +0.3 2,663,972 - -1.3 2,664,050 + +0.7 2,664,053 + +1.6 2,664,053 + -0.4 2,664,053 + -1.9 2,664,053 + +0.2 2,664,053 + -0.0 2,664,054 - -0.0 2,664,054 - -0.0 2,664,054 - -0.4 2,664,064 + -0.4 2,664,065 - -0.7 2,664,065 - -0.7 2,664,065 - -0.5 2,664,065 - +1.9 2,664,119 - -0.1 2,664,119 - -2.0 2,664,217 - Echvi_2241 0.13 -1.0 2,664,264 - Echvi_2241 0.15 +1.3 2,664,321 - Echvi_2241 0.18 -0.4 2,664,400 + Echvi_2241 0.22 -0.5 2,664,401 - Echvi_2241 0.22 +0.7 2,664,433 + Echvi_2241 0.24 -1.0 2,664,460 + Echvi_2241 0.25 -1.0 2,664,460 + Echvi_2241 0.25 +0.1 2,664,632 + Echvi_2241 0.34 +1.3 2,664,634 + Echvi_2241 0.34 +0.4 2,664,634 + Echvi_2241 0.34 +1.5 2,664,634 + Echvi_2241 0.34 -0.2 2,664,635 - Echvi_2241 0.34 -2.1 2,664,636 + Echvi_2241 0.34 +0.2 2,664,636 + Echvi_2241 0.34 -1.2 2,664,636 + Echvi_2241 0.34 -0.3 2,664,636 + Echvi_2241 0.34 -1.0 2,664,636 + Echvi_2241 0.34 -0.8 2,664,637 - Echvi_2241 0.34 -0.8 2,664,637 - Echvi_2241 0.34 -0.2 2,664,637 - Echvi_2241 0.34 -0.9 2,664,637 - Echvi_2241 0.34 -0.2 2,664,637 - Echvi_2241 0.34 +0.5 2,664,637 - Echvi_2241 0.34 -0.5 2,664,637 - Echvi_2241 0.34 -1.0 2,664,637 - Echvi_2241 0.34 +0.5 2,664,673 + Echvi_2241 0.36 -1.0 2,664,673 + Echvi_2241 0.36 -1.1 2,664,673 + Echvi_2241 0.36 +0.7 2,664,673 + Echvi_2241 0.36 +1.7 2,664,831 + Echvi_2241 0.44 -0.3 2,664,831 + Echvi_2241 0.44 +1.4 2,664,857 + Echvi_2241 0.45 -0.1 2,664,858 - Echvi_2241 0.45 -0.6 2,664,916 + Echvi_2241 0.48 +1.6 2,664,917 - Echvi_2241 0.48 +0.2
Or see this region's nucleotide sequence