Experiment: m.b. Lomefloxacin 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0679 and Echvi_0680 are separated by 355 nucleotides
Echvi_0679: Echvi_0679 - hypothetical protein, at 763,257 to 764,255
_0679
Echvi_0680: Echvi_0680 - RND family efflux transporter, MFP subunit, at 764,611 to 765,693
_0680
Position (kb) 763
764
765 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7
8
9
10 at 762.259 kb on + strand at 762.295 kb on - strand at 762.295 kb on - strand at 762.314 kb on + strand at 762.329 kb on + strand at 762.330 kb on - strand at 762.345 kb on + strand at 762.351 kb on - strand at 762.351 kb on - strand at 762.424 kb on - strand at 762.477 kb on - strand at 762.583 kb on + strand at 762.583 kb on + strand at 762.584 kb on - strand at 762.584 kb on - strand at 762.584 kb on - strand at 762.585 kb on + strand at 762.585 kb on + strand at 762.586 kb on - strand at 762.586 kb on - strand at 762.586 kb on - strand at 762.586 kb on - strand at 762.586 kb on - strand at 762.590 kb on + strand at 762.590 kb on + strand at 762.590 kb on + strand at 762.591 kb on - strand at 762.591 kb on - strand at 762.591 kb on - strand at 762.591 kb on - strand at 762.591 kb on - strand at 762.591 kb on - strand at 762.594 kb on + strand at 762.594 kb on + strand at 762.594 kb on + strand at 762.594 kb on + strand at 762.594 kb on + strand at 762.594 kb on + strand at 762.595 kb on - strand at 762.595 kb on - strand at 762.595 kb on - strand at 762.595 kb on - strand at 762.595 kb on - strand at 762.595 kb on - strand at 762.606 kb on - strand at 762.611 kb on - strand at 762.637 kb on + strand at 762.637 kb on + strand at 762.637 kb on + strand at 762.659 kb on + strand at 762.660 kb on - strand at 762.660 kb on - strand at 762.666 kb on + strand at 762.666 kb on + strand at 762.670 kb on + strand at 762.670 kb on + strand at 762.670 kb on + strand at 762.670 kb on + strand at 762.670 kb on + strand at 762.670 kb on + strand at 762.671 kb on - strand at 762.672 kb on + strand at 762.672 kb on + strand at 762.673 kb on - strand at 762.690 kb on - strand at 762.690 kb on - strand at 762.690 kb on - strand at 762.746 kb on + strand at 762.874 kb on + strand at 762.892 kb on + strand at 762.897 kb on - strand at 762.897 kb on - strand at 762.984 kb on + strand at 762.984 kb on + strand at 762.992 kb on - strand at 763.024 kb on + strand at 763.024 kb on + strand at 763.079 kb on + strand at 763.080 kb on - strand at 763.080 kb on - strand at 763.084 kb on + strand at 763.085 kb on - strand at 763.085 kb on - strand at 763.094 kb on + strand at 763.094 kb on + strand at 763.094 kb on + strand at 763.095 kb on - strand at 763.105 kb on - strand at 763.105 kb on - strand at 763.126 kb on + strand at 763.127 kb on - strand at 763.127 kb on - strand at 763.169 kb on - strand at 763.202 kb on + strand at 763.202 kb on + strand at 763.203 kb on - strand at 763.206 kb on + strand at 763.222 kb on - strand at 763.250 kb on + strand at 763.250 kb on + strand at 763.359 kb on + strand, within Echvi_0679 at 763.360 kb on - strand, within Echvi_0679 at 763.360 kb on - strand, within Echvi_0679 at 763.360 kb on - strand, within Echvi_0679 at 763.433 kb on + strand, within Echvi_0679 at 763.444 kb on + strand, within Echvi_0679 at 763.467 kb on + strand, within Echvi_0679 at 763.468 kb on - strand, within Echvi_0679 at 763.468 kb on - strand, within Echvi_0679 at 763.468 kb on - strand, within Echvi_0679 at 763.474 kb on + strand, within Echvi_0679 at 763.474 kb on + strand, within Echvi_0679 at 763.475 kb on - strand, within Echvi_0679 at 763.523 kb on - strand, within Echvi_0679 at 763.535 kb on + strand, within Echvi_0679 at 763.542 kb on + strand, within Echvi_0679 at 763.543 kb on - strand, within Echvi_0679 at 763.605 kb on + strand, within Echvi_0679 at 763.606 kb on - strand, within Echvi_0679 at 763.606 kb on - strand, within Echvi_0679 at 763.607 kb on + strand, within Echvi_0679 at 763.608 kb on - strand, within Echvi_0679 at 763.659 kb on + strand, within Echvi_0679 at 763.660 kb on - strand, within Echvi_0679 at 763.660 kb on - strand, within Echvi_0679 at 763.662 kb on + strand, within Echvi_0679 at 763.662 kb on + strand, within Echvi_0679 at 763.663 kb on - strand, within Echvi_0679 at 763.663 kb on - strand, within Echvi_0679 at 763.663 kb on - strand, within Echvi_0679 at 763.678 kb on + strand, within Echvi_0679 at 763.679 kb on - strand, within Echvi_0679 at 763.694 kb on - strand, within Echvi_0679 at 763.694 kb on - strand, within Echvi_0679 at 763.718 kb on + strand, within Echvi_0679 at 763.738 kb on - strand, within Echvi_0679 at 763.739 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.862 kb on - strand, within Echvi_0679 at 763.862 kb on - strand, within Echvi_0679 at 763.862 kb on - strand, within Echvi_0679 at 763.862 kb on - strand, within Echvi_0679 at 763.926 kb on + strand, within Echvi_0679 at 763.926 kb on + strand, within Echvi_0679 at 763.926 kb on + strand, within Echvi_0679 at 763.926 kb on + strand, within Echvi_0679 at 763.927 kb on - strand, within Echvi_0679 at 763.950 kb on + strand, within Echvi_0679 at 763.950 kb on + strand, within Echvi_0679 at 763.950 kb on + strand, within Echvi_0679 at 763.951 kb on - strand, within Echvi_0679 at 763.994 kb on + strand, within Echvi_0679 at 764.046 kb on + strand, within Echvi_0679 at 764.047 kb on - strand, within Echvi_0679 at 764.103 kb on + strand, within Echvi_0679 at 764.103 kb on + strand, within Echvi_0679 at 764.231 kb on + strand at 764.231 kb on + strand at 764.305 kb on + strand at 764.329 kb on - strand at 764.352 kb on - strand at 764.388 kb on - strand at 764.392 kb on + strand at 764.416 kb on + strand at 764.568 kb on - strand at 764.590 kb on + strand at 764.591 kb on - strand at 764.630 kb on + strand at 764.640 kb on - strand at 764.676 kb on - strand at 764.687 kb on + strand at 764.688 kb on - strand at 764.931 kb on + strand, within Echvi_0680 at 764.986 kb on + strand, within Echvi_0680 at 764.987 kb on - strand, within Echvi_0680 at 765.049 kb on + strand, within Echvi_0680 at 765.049 kb on + strand, within Echvi_0680 at 765.050 kb on - strand, within Echvi_0680 at 765.050 kb on - strand, within Echvi_0680 at 765.070 kb on + strand, within Echvi_0680 at 765.071 kb on - strand, within Echvi_0680 at 765.071 kb on - strand, within Echvi_0680 at 765.071 kb on - strand, within Echvi_0680 at 765.075 kb on + strand, within Echvi_0680 at 765.076 kb on - strand, within Echvi_0680 at 765.150 kb on - strand, within Echvi_0680 at 765.150 kb on - strand, within Echvi_0680 at 765.210 kb on + strand, within Echvi_0680 at 765.210 kb on + strand, within Echvi_0680 at 765.211 kb on - strand, within Echvi_0680 at 765.211 kb on - strand, within Echvi_0680
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.025 mM remove 762,259 + -0.0 762,295 - -2.3 762,295 - +0.7 762,314 + -0.0 762,329 + +1.0 762,330 - -2.5 762,345 + +0.5 762,351 - -1.2 762,351 - +0.1 762,424 - -0.8 762,477 - -0.5 762,583 + -0.2 762,583 + +0.1 762,584 - +0.4 762,584 - -1.9 762,584 - +0.4 762,585 + -0.3 762,585 + -0.6 762,586 - +0.2 762,586 - -0.3 762,586 - +0.6 762,586 - -1.6 762,586 - -0.3 762,590 + +0.4 762,590 + +0.9 762,590 + -0.2 762,591 - -0.0 762,591 - -0.4 762,591 - -1.1 762,591 - -1.1 762,591 - +1.0 762,591 - -2.7 762,594 + -0.6 762,594 + -0.8 762,594 + -0.0 762,594 + +0.5 762,594 + -0.5 762,594 + -1.0 762,595 - -0.3 762,595 - +1.2 762,595 - -0.8 762,595 - -0.4 762,595 - +0.6 762,595 - -1.1 762,606 - +0.4 762,611 - -1.0 762,637 + +0.5 762,637 + -0.4 762,637 + -0.9 762,659 + -1.7 762,660 - -0.9 762,660 - -1.5 762,666 + +0.4 762,666 + +1.3 762,670 + -0.8 762,670 + +3.0 762,670 + +0.5 762,670 + +0.5 762,670 + +0.4 762,670 + -0.2 762,671 - +1.3 762,672 + +1.1 762,672 + +0.8 762,673 - +0.6 762,690 - +0.4 762,690 - +1.0 762,690 - +0.4 762,746 + +0.4 762,874 + -1.0 762,892 + +0.3 762,897 - +0.2 762,897 - +1.7 762,984 + +0.7 762,984 + +1.4 762,992 - -1.3 763,024 + +0.3 763,024 + +2.6 763,079 + +1.2 763,080 - +0.8 763,080 - -0.7 763,084 + +0.3 763,085 - -0.1 763,085 - -0.7 763,094 + -0.4 763,094 + +1.2 763,094 + +1.8 763,095 - -1.0 763,105 - +2.0 763,105 - -0.2 763,126 + +1.4 763,127 - +0.3 763,127 - -0.0 763,169 - +0.4 763,202 + +0.8 763,202 + +2.5 763,203 - +0.5 763,206 + +2.3 763,222 - -0.1 763,250 + +1.1 763,250 + -0.4 763,359 + Echvi_0679 0.10 -0.9 763,360 - Echvi_0679 0.10 -0.8 763,360 - Echvi_0679 0.10 -1.7 763,360 - Echvi_0679 0.10 -0.8 763,433 + Echvi_0679 0.18 -1.4 763,444 + Echvi_0679 0.19 -3.0 763,467 + Echvi_0679 0.21 -2.2 763,468 - Echvi_0679 0.21 -1.0 763,468 - Echvi_0679 0.21 -0.5 763,468 - Echvi_0679 0.21 +0.6 763,474 + Echvi_0679 0.22 -0.6 763,474 + Echvi_0679 0.22 -0.1 763,475 - Echvi_0679 0.22 -1.2 763,523 - Echvi_0679 0.27 -0.1 763,535 + Echvi_0679 0.28 +0.2 763,542 + Echvi_0679 0.29 -1.3 763,543 - Echvi_0679 0.29 +4.6 763,605 + Echvi_0679 0.35 -0.3 763,606 - Echvi_0679 0.35 -0.6 763,606 - Echvi_0679 0.35 +0.3 763,607 + Echvi_0679 0.35 -0.6 763,608 - Echvi_0679 0.35 +0.4 763,659 + Echvi_0679 0.40 +1.0 763,660 - Echvi_0679 0.40 -1.0 763,660 - Echvi_0679 0.40 -0.5 763,662 + Echvi_0679 0.41 +0.1 763,662 + Echvi_0679 0.41 -0.3 763,663 - Echvi_0679 0.41 +0.4 763,663 - Echvi_0679 0.41 +0.0 763,663 - Echvi_0679 0.41 -2.1 763,678 + Echvi_0679 0.42 -1.9 763,679 - Echvi_0679 0.42 -0.8 763,694 - Echvi_0679 0.44 -1.0 763,694 - Echvi_0679 0.44 -0.3 763,718 + Echvi_0679 0.46 -0.8 763,738 - Echvi_0679 0.48 -0.7 763,739 + Echvi_0679 0.48 +1.6 763,861 + Echvi_0679 0.60 -0.2 763,861 + Echvi_0679 0.60 +1.7 763,861 + Echvi_0679 0.60 +2.2 763,861 + Echvi_0679 0.60 +1.4 763,861 + Echvi_0679 0.60 +0.7 763,861 + Echvi_0679 0.60 +1.7 763,861 + Echvi_0679 0.60 +1.3 763,862 - Echvi_0679 0.61 -1.9 763,862 - Echvi_0679 0.61 -2.2 763,862 - Echvi_0679 0.61 +0.2 763,862 - Echvi_0679 0.61 +1.0 763,926 + Echvi_0679 0.67 +1.9 763,926 + Echvi_0679 0.67 +2.4 763,926 + Echvi_0679 0.67 +2.5 763,926 + Echvi_0679 0.67 +2.4 763,927 - Echvi_0679 0.67 -0.3 763,950 + Echvi_0679 0.69 -0.3 763,950 + Echvi_0679 0.69 +3.7 763,950 + Echvi_0679 0.69 +3.4 763,951 - Echvi_0679 0.69 +0.8 763,994 + Echvi_0679 0.74 +3.6 764,046 + Echvi_0679 0.79 +4.6 764,047 - Echvi_0679 0.79 -1.2 764,103 + Echvi_0679 0.85 +7.1 764,103 + Echvi_0679 0.85 +7.1 764,231 + +9.2 764,231 + +8.2 764,305 + +10.3 764,329 - -0.9 764,352 - -1.0 764,388 - -1.2 764,392 + +10.3 764,416 + +10.4 764,568 - -1.5 764,590 + +2.9 764,591 - +0.5 764,630 + -0.8 764,640 - +0.7 764,676 - -2.5 764,687 + -2.6 764,688 - +1.4 764,931 + Echvi_0680 0.30 -0.1 764,986 + Echvi_0680 0.35 -2.3 764,987 - Echvi_0680 0.35 -3.5 765,049 + Echvi_0680 0.40 -1.2 765,049 + Echvi_0680 0.40 -2.4 765,050 - Echvi_0680 0.41 -0.3 765,050 - Echvi_0680 0.41 -3.3 765,070 + Echvi_0680 0.42 -0.8 765,071 - Echvi_0680 0.42 -2.2 765,071 - Echvi_0680 0.42 -1.4 765,071 - Echvi_0680 0.42 -1.2 765,075 + Echvi_0680 0.43 -0.0 765,076 - Echvi_0680 0.43 -0.8 765,150 - Echvi_0680 0.50 -1.4 765,150 - Echvi_0680 0.50 -1.2 765,210 + Echvi_0680 0.55 +0.1 765,210 + Echvi_0680 0.55 -0.2 765,211 - Echvi_0680 0.55 -0.3 765,211 - Echvi_0680 0.55 -0.8
Or see this region's nucleotide sequence