Experiment: m.b. Lomefloxacin 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0509 and Echvi_0510 are separated by 151 nucleotides Echvi_0510 and Echvi_0511 are separated by 199 nucleotides
Echvi_0509: Echvi_0509 - Predicted oxidoreductases (related to aryl-alcohol dehydrogenases), at 569,075 to 570,109
_0509
Echvi_0510: Echvi_0510 - Transcriptional regulators, at 570,261 to 571,283
_0510
Echvi_0511: Echvi_0511 - Superfamily II DNA and RNA helicases, at 571,483 to 572,733
_0511
Position (kb) 570
571
572 Strain fitness (log2 ratio) -2
-1
0
1
2 at 569.353 kb on - strand, within Echvi_0509 at 569.353 kb on - strand, within Echvi_0509 at 569.353 kb on - strand, within Echvi_0509 at 569.353 kb on - strand, within Echvi_0509 at 569.404 kb on + strand, within Echvi_0509 at 569.404 kb on + strand, within Echvi_0509 at 569.405 kb on - strand, within Echvi_0509 at 569.405 kb on - strand, within Echvi_0509 at 569.434 kb on + strand, within Echvi_0509 at 569.434 kb on + strand, within Echvi_0509 at 569.601 kb on + strand, within Echvi_0509 at 569.664 kb on + strand, within Echvi_0509 at 569.664 kb on + strand, within Echvi_0509 at 569.664 kb on + strand, within Echvi_0509 at 569.664 kb on + strand, within Echvi_0509 at 569.665 kb on - strand, within Echvi_0509 at 569.665 kb on - strand, within Echvi_0509 at 569.703 kb on + strand, within Echvi_0509 at 569.755 kb on - strand, within Echvi_0509 at 569.938 kb on - strand, within Echvi_0509 at 569.977 kb on - strand, within Echvi_0509 at 570.009 kb on - strand at 570.114 kb on - strand at 570.114 kb on - strand at 570.154 kb on + strand at 570.405 kb on + strand, within Echvi_0510 at 570.406 kb on - strand, within Echvi_0510 at 570.408 kb on - strand, within Echvi_0510 at 570.487 kb on - strand, within Echvi_0510 at 570.514 kb on + strand, within Echvi_0510 at 570.543 kb on + strand, within Echvi_0510 at 570.543 kb on + strand, within Echvi_0510 at 570.543 kb on + strand, within Echvi_0510 at 570.553 kb on + strand, within Echvi_0510 at 570.553 kb on + strand, within Echvi_0510 at 570.553 kb on + strand, within Echvi_0510 at 570.554 kb on - strand, within Echvi_0510 at 570.613 kb on + strand, within Echvi_0510 at 570.694 kb on + strand, within Echvi_0510 at 570.694 kb on + strand, within Echvi_0510 at 570.694 kb on + strand, within Echvi_0510 at 570.694 kb on + strand, within Echvi_0510 at 570.694 kb on + strand, within Echvi_0510 at 570.695 kb on - strand, within Echvi_0510 at 570.695 kb on - strand, within Echvi_0510 at 570.695 kb on - strand, within Echvi_0510 at 570.779 kb on + strand, within Echvi_0510 at 570.780 kb on - strand, within Echvi_0510 at 570.892 kb on + strand, within Echvi_0510 at 571.198 kb on + strand at 571.199 kb on - strand at 571.286 kb on + strand at 571.286 kb on + strand at 571.287 kb on - strand at 571.312 kb on - strand at 571.362 kb on + strand at 571.368 kb on + strand at 571.368 kb on + strand at 571.400 kb on + strand at 571.401 kb on - strand at 571.401 kb on - strand at 571.401 kb on - strand at 571.401 kb on - strand at 571.432 kb on - strand at 571.492 kb on - strand at 571.520 kb on + strand at 571.520 kb on + strand at 571.521 kb on - strand at 571.530 kb on - strand at 571.575 kb on + strand at 571.575 kb on + strand at 571.576 kb on - strand at 571.668 kb on + strand, within Echvi_0511 at 571.668 kb on + strand, within Echvi_0511 at 571.668 kb on + strand, within Echvi_0511 at 571.849 kb on - strand, within Echvi_0511 at 571.859 kb on + strand, within Echvi_0511 at 572.004 kb on + strand, within Echvi_0511 at 572.005 kb on - strand, within Echvi_0511 at 572.150 kb on - strand, within Echvi_0511 at 572.155 kb on + strand, within Echvi_0511 at 572.156 kb on - strand, within Echvi_0511 at 572.156 kb on - strand, within Echvi_0511 at 572.158 kb on + strand, within Echvi_0511 at 572.166 kb on + strand, within Echvi_0511 at 572.167 kb on - strand, within Echvi_0511 at 572.167 kb on - strand, within Echvi_0511 at 572.197 kb on - strand, within Echvi_0511
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.025 mM remove 569,353 - Echvi_0509 0.27 +2.3 569,353 - Echvi_0509 0.27 -1.7 569,353 - Echvi_0509 0.27 +0.4 569,353 - Echvi_0509 0.27 -0.7 569,404 + Echvi_0509 0.32 -1.5 569,404 + Echvi_0509 0.32 +0.4 569,405 - Echvi_0509 0.32 -0.3 569,405 - Echvi_0509 0.32 -0.1 569,434 + Echvi_0509 0.35 +0.4 569,434 + Echvi_0509 0.35 -0.6 569,601 + Echvi_0509 0.51 +0.7 569,664 + Echvi_0509 0.57 -0.6 569,664 + Echvi_0509 0.57 -0.1 569,664 + Echvi_0509 0.57 +2.1 569,664 + Echvi_0509 0.57 -0.7 569,665 - Echvi_0509 0.57 -0.4 569,665 - Echvi_0509 0.57 -0.0 569,703 + Echvi_0509 0.61 -0.9 569,755 - Echvi_0509 0.66 +0.6 569,938 - Echvi_0509 0.83 +0.5 569,977 - Echvi_0509 0.87 -0.7 570,009 - +0.7 570,114 - -0.6 570,114 - -1.6 570,154 + +0.4 570,405 + Echvi_0510 0.14 +1.1 570,406 - Echvi_0510 0.14 -0.5 570,408 - Echvi_0510 0.14 +0.5 570,487 - Echvi_0510 0.22 -0.9 570,514 + Echvi_0510 0.25 +1.4 570,543 + Echvi_0510 0.28 -1.1 570,543 + Echvi_0510 0.28 -0.0 570,543 + Echvi_0510 0.28 -0.6 570,553 + Echvi_0510 0.29 -0.9 570,553 + Echvi_0510 0.29 +0.9 570,553 + Echvi_0510 0.29 +0.1 570,554 - Echvi_0510 0.29 +0.7 570,613 + Echvi_0510 0.34 -0.1 570,694 + Echvi_0510 0.42 +1.7 570,694 + Echvi_0510 0.42 +0.2 570,694 + Echvi_0510 0.42 +0.3 570,694 + Echvi_0510 0.42 +1.3 570,694 + Echvi_0510 0.42 +1.1 570,695 - Echvi_0510 0.42 +0.7 570,695 - Echvi_0510 0.42 -1.1 570,695 - Echvi_0510 0.42 -0.5 570,779 + Echvi_0510 0.51 -1.5 570,780 - Echvi_0510 0.51 +0.4 570,892 + Echvi_0510 0.62 +0.2 571,198 + -0.4 571,199 - -1.6 571,286 + +1.6 571,286 + +0.2 571,287 - -0.8 571,312 - -0.2 571,362 + -0.9 571,368 + +0.8 571,368 + -1.5 571,400 + -0.2 571,401 - -0.0 571,401 - +0.5 571,401 - +0.2 571,401 - +0.4 571,432 - -1.1 571,492 - +0.2 571,520 + -1.8 571,520 + -0.6 571,521 - -0.6 571,530 - +0.0 571,575 + -2.0 571,575 + -0.4 571,576 - -0.8 571,668 + Echvi_0511 0.15 -0.7 571,668 + Echvi_0511 0.15 -0.0 571,668 + Echvi_0511 0.15 +1.5 571,849 - Echvi_0511 0.29 +0.2 571,859 + Echvi_0511 0.30 +1.4 572,004 + Echvi_0511 0.42 -0.5 572,005 - Echvi_0511 0.42 -0.2 572,150 - Echvi_0511 0.53 -0.3 572,155 + Echvi_0511 0.54 -0.5 572,156 - Echvi_0511 0.54 +0.3 572,156 - Echvi_0511 0.54 -0.4 572,158 + Echvi_0511 0.54 -0.4 572,166 + Echvi_0511 0.55 +0.6 572,167 - Echvi_0511 0.55 +0.3 572,167 - Echvi_0511 0.55 -2.6 572,197 - Echvi_0511 0.57 +0.9
Or see this region's nucleotide sequence