Experiment: m.b. Lomefloxacin 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0492 and Echvi_0493 are separated by 14 nucleotides Echvi_0493 and Echvi_0494 are separated by 250 nucleotides
Echvi_0492: Echvi_0492 - SusD family., at 545,162 to 546,847
_0492
Echvi_0493: Echvi_0493 - TonB-linked outer membrane protein, SusC/RagA family, at 546,862 to 549,831
_0493
Echvi_0494: Echvi_0494 - hypothetical protein, at 550,082 to 551,230
_0494
Position (kb) 546
547
548
549
550 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 546.080 kb on + strand, within Echvi_0492 at 546.081 kb on - strand, within Echvi_0492 at 546.115 kb on + strand, within Echvi_0492 at 546.156 kb on + strand, within Echvi_0492 at 546.159 kb on - strand, within Echvi_0492 at 546.268 kb on + strand, within Echvi_0492 at 546.269 kb on - strand, within Echvi_0492 at 546.335 kb on + strand, within Echvi_0492 at 546.367 kb on + strand, within Echvi_0492 at 546.372 kb on + strand, within Echvi_0492 at 546.373 kb on - strand, within Echvi_0492 at 546.458 kb on - strand, within Echvi_0492 at 546.481 kb on + strand, within Echvi_0492 at 546.498 kb on + strand, within Echvi_0492 at 546.498 kb on + strand, within Echvi_0492 at 546.499 kb on - strand, within Echvi_0492 at 546.499 kb on - strand, within Echvi_0492 at 546.510 kb on - strand, within Echvi_0492 at 546.514 kb on + strand, within Echvi_0492 at 546.514 kb on + strand, within Echvi_0492 at 546.549 kb on + strand, within Echvi_0492 at 546.655 kb on + strand, within Echvi_0492 at 546.670 kb on - strand, within Echvi_0492 at 546.675 kb on + strand, within Echvi_0492 at 546.676 kb on - strand, within Echvi_0492 at 546.676 kb on - strand, within Echvi_0492 at 546.747 kb on - strand at 546.796 kb on + strand at 546.797 kb on - strand at 546.816 kb on - strand at 546.821 kb on + strand at 546.839 kb on + strand at 546.839 kb on + strand at 546.839 kb on + strand at 546.841 kb on + strand at 546.841 kb on + strand at 546.863 kb on + strand at 546.871 kb on + strand at 546.876 kb on + strand at 546.908 kb on + strand at 546.908 kb on + strand at 546.908 kb on + strand at 546.908 kb on + strand at 546.912 kb on + strand at 547.031 kb on + strand at 547.031 kb on + strand at 547.032 kb on - strand at 547.032 kb on - strand at 547.061 kb on + strand at 547.091 kb on + strand at 547.091 kb on + strand at 547.095 kb on + strand at 547.095 kb on + strand at 547.095 kb on + strand at 547.096 kb on - strand at 547.096 kb on - strand at 547.096 kb on - strand at 547.097 kb on + strand at 547.097 kb on + strand at 547.098 kb on - strand at 547.098 kb on - strand at 547.098 kb on - strand at 547.133 kb on + strand at 547.133 kb on + strand at 547.134 kb on - strand at 547.134 kb on - strand at 547.187 kb on + strand, within Echvi_0493 at 547.187 kb on + strand, within Echvi_0493 at 547.188 kb on - strand, within Echvi_0493 at 547.464 kb on + strand, within Echvi_0493 at 547.465 kb on - strand, within Echvi_0493 at 547.465 kb on - strand, within Echvi_0493 at 547.509 kb on + strand, within Echvi_0493 at 547.528 kb on - strand, within Echvi_0493 at 547.528 kb on - strand, within Echvi_0493 at 547.559 kb on - strand, within Echvi_0493 at 547.569 kb on + strand, within Echvi_0493 at 547.569 kb on + strand, within Echvi_0493 at 547.571 kb on + strand, within Echvi_0493 at 547.572 kb on - strand, within Echvi_0493 at 547.691 kb on + strand, within Echvi_0493 at 547.692 kb on - strand, within Echvi_0493 at 547.692 kb on - strand, within Echvi_0493 at 547.708 kb on + strand, within Echvi_0493 at 547.728 kb on + strand, within Echvi_0493 at 547.728 kb on + strand, within Echvi_0493 at 547.729 kb on - strand, within Echvi_0493 at 547.747 kb on - strand, within Echvi_0493 at 547.748 kb on + strand, within Echvi_0493 at 547.773 kb on + strand, within Echvi_0493 at 547.856 kb on + strand, within Echvi_0493 at 547.856 kb on + strand, within Echvi_0493 at 547.857 kb on - strand, within Echvi_0493 at 547.903 kb on - strand, within Echvi_0493 at 547.933 kb on + strand, within Echvi_0493 at 547.935 kb on + strand, within Echvi_0493 at 547.935 kb on + strand, within Echvi_0493 at 547.936 kb on - strand, within Echvi_0493 at 547.936 kb on - strand, within Echvi_0493 at 547.975 kb on + strand, within Echvi_0493 at 548.061 kb on + strand, within Echvi_0493 at 548.062 kb on - strand, within Echvi_0493 at 548.121 kb on - strand, within Echvi_0493 at 548.133 kb on - strand, within Echvi_0493 at 548.138 kb on + strand, within Echvi_0493 at 548.138 kb on + strand, within Echvi_0493 at 548.138 kb on + strand, within Echvi_0493 at 548.138 kb on + strand, within Echvi_0493 at 548.138 kb on + strand, within Echvi_0493 at 548.139 kb on - strand, within Echvi_0493 at 548.139 kb on - strand, within Echvi_0493 at 548.171 kb on + strand, within Echvi_0493 at 548.175 kb on + strand, within Echvi_0493 at 548.176 kb on - strand, within Echvi_0493 at 548.205 kb on + strand, within Echvi_0493 at 548.241 kb on + strand, within Echvi_0493 at 548.389 kb on + strand, within Echvi_0493 at 548.389 kb on + strand, within Echvi_0493 at 548.389 kb on + strand, within Echvi_0493 at 548.389 kb on + strand, within Echvi_0493 at 548.390 kb on - strand, within Echvi_0493 at 548.415 kb on - strand, within Echvi_0493 at 548.424 kb on + strand, within Echvi_0493 at 548.425 kb on - strand, within Echvi_0493 at 548.430 kb on + strand, within Echvi_0493 at 548.430 kb on + strand, within Echvi_0493 at 548.430 kb on + strand, within Echvi_0493 at 548.430 kb on + strand, within Echvi_0493 at 548.431 kb on - strand, within Echvi_0493 at 548.462 kb on + strand, within Echvi_0493 at 548.462 kb on + strand, within Echvi_0493 at 548.462 kb on + strand, within Echvi_0493 at 548.462 kb on + strand, within Echvi_0493 at 548.462 kb on + strand, within Echvi_0493 at 548.462 kb on + strand, within Echvi_0493 at 548.462 kb on + strand, within Echvi_0493 at 548.462 kb on + strand, within Echvi_0493 at 548.462 kb on + strand, within Echvi_0493 at 548.462 kb on + strand, within Echvi_0493 at 548.462 kb on + strand, within Echvi_0493 at 548.462 kb on + strand, within Echvi_0493 at 548.462 kb on + strand, within Echvi_0493 at 548.462 kb on + strand, within Echvi_0493 at 548.463 kb on - strand, within Echvi_0493 at 548.463 kb on - strand, within Echvi_0493 at 548.463 kb on - strand, within Echvi_0493 at 548.463 kb on - strand, within Echvi_0493 at 548.463 kb on - strand, within Echvi_0493 at 548.463 kb on - strand, within Echvi_0493 at 548.463 kb on - strand, within Echvi_0493 at 548.463 kb on - strand, within Echvi_0493 at 548.463 kb on - strand, within Echvi_0493 at 548.494 kb on + strand, within Echvi_0493 at 548.494 kb on + strand, within Echvi_0493 at 548.496 kb on + strand, within Echvi_0493 at 548.586 kb on + strand, within Echvi_0493 at 548.586 kb on + strand, within Echvi_0493 at 548.616 kb on + strand, within Echvi_0493 at 548.616 kb on + strand, within Echvi_0493 at 548.616 kb on + strand, within Echvi_0493 at 548.622 kb on - strand, within Echvi_0493 at 548.699 kb on + strand, within Echvi_0493 at 548.699 kb on + strand, within Echvi_0493 at 548.700 kb on - strand, within Echvi_0493 at 548.700 kb on - strand, within Echvi_0493 at 548.700 kb on - strand, within Echvi_0493 at 548.700 kb on - strand, within Echvi_0493 at 548.789 kb on + strand, within Echvi_0493 at 548.837 kb on - strand, within Echvi_0493 at 548.976 kb on + strand, within Echvi_0493 at 549.008 kb on + strand, within Echvi_0493 at 549.029 kb on + strand, within Echvi_0493 at 549.029 kb on + strand, within Echvi_0493 at 549.029 kb on + strand, within Echvi_0493 at 549.029 kb on + strand, within Echvi_0493 at 549.029 kb on + strand, within Echvi_0493 at 549.030 kb on - strand at 549.030 kb on - strand, within Echvi_0493 at 549.055 kb on + strand, within Echvi_0493 at 549.055 kb on + strand, within Echvi_0493 at 549.056 kb on - strand, within Echvi_0493 at 549.083 kb on + strand, within Echvi_0493 at 549.083 kb on + strand, within Echvi_0493 at 549.174 kb on - strand, within Echvi_0493 at 549.254 kb on + strand, within Echvi_0493 at 549.254 kb on + strand, within Echvi_0493 at 549.333 kb on + strand, within Echvi_0493 at 549.333 kb on + strand, within Echvi_0493 at 549.367 kb on - strand, within Echvi_0493 at 549.448 kb on + strand, within Echvi_0493 at 549.490 kb on + strand, within Echvi_0493 at 549.490 kb on + strand, within Echvi_0493 at 549.493 kb on + strand, within Echvi_0493 at 549.493 kb on + strand, within Echvi_0493 at 549.493 kb on + strand, within Echvi_0493 at 549.494 kb on - strand, within Echvi_0493 at 549.494 kb on - strand, within Echvi_0493 at 549.494 kb on - strand, within Echvi_0493 at 549.499 kb on + strand, within Echvi_0493 at 549.529 kb on - strand, within Echvi_0493 at 549.573 kb on + strand at 549.627 kb on + strand at 549.627 kb on + strand at 549.782 kb on - strand at 549.790 kb on + strand at 549.818 kb on - strand at 549.845 kb on + strand at 549.859 kb on + strand at 549.872 kb on + strand at 549.872 kb on + strand at 550.034 kb on - strand at 550.039 kb on + strand at 550.065 kb on - strand at 550.129 kb on + strand at 550.130 kb on - strand at 550.236 kb on - strand at 550.247 kb on + strand, within Echvi_0494 at 550.290 kb on - strand, within Echvi_0494 at 550.458 kb on + strand, within Echvi_0494 at 550.459 kb on - strand, within Echvi_0494 at 550.459 kb on - strand, within Echvi_0494 at 550.499 kb on + strand, within Echvi_0494 at 550.501 kb on + strand, within Echvi_0494 at 550.502 kb on - strand, within Echvi_0494 at 550.521 kb on - strand, within Echvi_0494 at 550.521 kb on - strand, within Echvi_0494 at 550.583 kb on - strand, within Echvi_0494 at 550.583 kb on - strand, within Echvi_0494 at 550.616 kb on + strand, within Echvi_0494 at 550.617 kb on - strand, within Echvi_0494 at 550.631 kb on - strand, within Echvi_0494 at 550.641 kb on - strand, within Echvi_0494 at 550.650 kb on - strand, within Echvi_0494 at 550.653 kb on + strand, within Echvi_0494 at 550.653 kb on + strand, within Echvi_0494 at 550.653 kb on + strand, within Echvi_0494 at 550.654 kb on - strand, within Echvi_0494 at 550.703 kb on + strand, within Echvi_0494 at 550.744 kb on + strand, within Echvi_0494 at 550.745 kb on - strand, within Echvi_0494 at 550.810 kb on + strand, within Echvi_0494
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.025 mM remove 546,080 + Echvi_0492 0.54 +0.3 546,081 - Echvi_0492 0.55 -0.5 546,115 + Echvi_0492 0.57 -0.5 546,156 + Echvi_0492 0.59 -0.3 546,159 - Echvi_0492 0.59 -1.3 546,268 + Echvi_0492 0.66 +0.2 546,269 - Echvi_0492 0.66 -0.0 546,335 + Echvi_0492 0.70 +0.4 546,367 + Echvi_0492 0.71 -1.2 546,372 + Echvi_0492 0.72 -1.1 546,373 - Echvi_0492 0.72 -0.6 546,458 - Echvi_0492 0.77 -0.1 546,481 + Echvi_0492 0.78 +1.1 546,498 + Echvi_0492 0.79 +0.1 546,498 + Echvi_0492 0.79 -0.2 546,499 - Echvi_0492 0.79 -0.3 546,499 - Echvi_0492 0.79 +0.1 546,510 - Echvi_0492 0.80 -1.0 546,514 + Echvi_0492 0.80 -0.1 546,514 + Echvi_0492 0.80 -0.2 546,549 + Echvi_0492 0.82 -1.5 546,655 + Echvi_0492 0.89 +0.3 546,670 - Echvi_0492 0.89 +0.5 546,675 + Echvi_0492 0.90 -0.7 546,676 - Echvi_0492 0.90 +0.4 546,676 - Echvi_0492 0.90 +0.8 546,747 - +0.1 546,796 + -3.0 546,797 - +0.7 546,816 - +0.3 546,821 + -0.3 546,839 + -0.0 546,839 + -0.2 546,839 + -0.2 546,841 + +0.4 546,841 + -0.1 546,863 + -2.1 546,871 + +0.2 546,876 + -1.2 546,908 + -2.3 546,908 + -0.8 546,908 + -2.3 546,908 + +0.9 546,912 + +0.4 547,031 + -1.1 547,031 + +0.0 547,032 - -0.6 547,032 - +0.4 547,061 + +0.0 547,091 + +0.1 547,091 + +0.4 547,095 + -1.9 547,095 + +1.6 547,095 + -1.4 547,096 - +1.1 547,096 - -0.4 547,096 - -0.4 547,097 + +1.0 547,097 + -1.1 547,098 - -1.7 547,098 - -0.2 547,098 - -0.9 547,133 + -0.6 547,133 + -0.4 547,134 - -0.2 547,134 - -1.0 547,187 + Echvi_0493 0.11 -0.2 547,187 + Echvi_0493 0.11 -1.6 547,188 - Echvi_0493 0.11 +0.6 547,464 + Echvi_0493 0.20 -0.2 547,465 - Echvi_0493 0.20 +1.2 547,465 - Echvi_0493 0.20 -0.4 547,509 + Echvi_0493 0.22 -0.5 547,528 - Echvi_0493 0.22 +0.6 547,528 - Echvi_0493 0.22 +0.7 547,559 - Echvi_0493 0.23 +0.1 547,569 + Echvi_0493 0.24 +0.0 547,569 + Echvi_0493 0.24 -0.8 547,571 + Echvi_0493 0.24 +1.5 547,572 - Echvi_0493 0.24 -0.2 547,691 + Echvi_0493 0.28 -0.6 547,692 - Echvi_0493 0.28 +0.2 547,692 - Echvi_0493 0.28 +0.4 547,708 + Echvi_0493 0.28 +0.2 547,728 + Echvi_0493 0.29 -0.7 547,728 + Echvi_0493 0.29 -0.1 547,729 - Echvi_0493 0.29 -0.0 547,747 - Echvi_0493 0.30 -0.9 547,748 + Echvi_0493 0.30 -1.0 547,773 + Echvi_0493 0.31 +1.2 547,856 + Echvi_0493 0.33 -0.7 547,856 + Echvi_0493 0.33 +0.0 547,857 - Echvi_0493 0.34 -0.8 547,903 - Echvi_0493 0.35 +0.5 547,933 + Echvi_0493 0.36 -0.0 547,935 + Echvi_0493 0.36 +1.5 547,935 + Echvi_0493 0.36 +1.0 547,936 - Echvi_0493 0.36 +0.8 547,936 - Echvi_0493 0.36 -1.8 547,975 + Echvi_0493 0.37 +2.5 548,061 + Echvi_0493 0.40 +0.9 548,062 - Echvi_0493 0.40 +0.3 548,121 - Echvi_0493 0.42 -0.8 548,133 - Echvi_0493 0.43 -0.5 548,138 + Echvi_0493 0.43 +0.6 548,138 + Echvi_0493 0.43 +1.1 548,138 + Echvi_0493 0.43 -1.9 548,138 + Echvi_0493 0.43 -0.1 548,138 + Echvi_0493 0.43 +0.0 548,139 - Echvi_0493 0.43 -1.1 548,139 - Echvi_0493 0.43 +2.1 548,171 + Echvi_0493 0.44 +0.7 548,175 + Echvi_0493 0.44 +0.1 548,176 - Echvi_0493 0.44 +1.1 548,205 + Echvi_0493 0.45 -1.2 548,241 + Echvi_0493 0.46 +0.1 548,389 + Echvi_0493 0.51 +3.1 548,389 + Echvi_0493 0.51 +0.3 548,389 + Echvi_0493 0.51 +0.5 548,389 + Echvi_0493 0.51 -0.4 548,390 - Echvi_0493 0.51 -0.2 548,415 - Echvi_0493 0.52 -0.1 548,424 + Echvi_0493 0.53 -2.8 548,425 - Echvi_0493 0.53 +0.3 548,430 + Echvi_0493 0.53 -0.9 548,430 + Echvi_0493 0.53 -1.5 548,430 + Echvi_0493 0.53 -0.3 548,430 + Echvi_0493 0.53 -0.2 548,431 - Echvi_0493 0.53 -0.2 548,462 + Echvi_0493 0.54 -0.8 548,462 + Echvi_0493 0.54 +0.3 548,462 + Echvi_0493 0.54 -0.0 548,462 + Echvi_0493 0.54 -0.7 548,462 + Echvi_0493 0.54 +1.1 548,462 + Echvi_0493 0.54 -0.0 548,462 + Echvi_0493 0.54 +0.7 548,462 + Echvi_0493 0.54 -0.4 548,462 + Echvi_0493 0.54 +0.1 548,462 + Echvi_0493 0.54 +0.2 548,462 + Echvi_0493 0.54 -1.7 548,462 + Echvi_0493 0.54 +0.5 548,462 + Echvi_0493 0.54 +0.8 548,462 + Echvi_0493 0.54 +0.4 548,463 - Echvi_0493 0.54 +0.8 548,463 - Echvi_0493 0.54 +0.1 548,463 - Echvi_0493 0.54 +0.7 548,463 - Echvi_0493 0.54 +1.1 548,463 - Echvi_0493 0.54 -0.2 548,463 - Echvi_0493 0.54 -1.1 548,463 - Echvi_0493 0.54 +1.2 548,463 - Echvi_0493 0.54 -1.2 548,463 - Echvi_0493 0.54 -0.6 548,494 + Echvi_0493 0.55 -0.5 548,494 + Echvi_0493 0.55 +0.3 548,496 + Echvi_0493 0.55 +0.5 548,586 + Echvi_0493 0.58 +0.0 548,586 + Echvi_0493 0.58 -2.3 548,616 + Echvi_0493 0.59 +0.9 548,616 + Echvi_0493 0.59 -0.7 548,616 + Echvi_0493 0.59 +0.1 548,622 - Echvi_0493 0.59 +0.2 548,699 + Echvi_0493 0.62 -1.5 548,699 + Echvi_0493 0.62 +2.9 548,700 - Echvi_0493 0.62 -0.4 548,700 - Echvi_0493 0.62 +0.0 548,700 - Echvi_0493 0.62 -0.2 548,700 - Echvi_0493 0.62 -0.5 548,789 + Echvi_0493 0.65 -0.2 548,837 - Echvi_0493 0.66 +1.1 548,976 + Echvi_0493 0.71 +0.1 549,008 + Echvi_0493 0.72 -0.0 549,029 + Echvi_0493 0.73 -1.6 549,029 + Echvi_0493 0.73 +0.8 549,029 + Echvi_0493 0.73 -0.3 549,029 + Echvi_0493 0.73 -0.7 549,029 + Echvi_0493 0.73 +0.9 549,030 - +2.1 549,030 - Echvi_0493 0.73 -0.1 549,055 + Echvi_0493 0.74 -0.2 549,055 + Echvi_0493 0.74 +0.5 549,056 - Echvi_0493 0.74 -0.9 549,083 + Echvi_0493 0.75 -0.8 549,083 + Echvi_0493 0.75 -0.3 549,174 - Echvi_0493 0.78 -0.7 549,254 + Echvi_0493 0.81 -0.5 549,254 + Echvi_0493 0.81 +0.4 549,333 + Echvi_0493 0.83 -0.7 549,333 + Echvi_0493 0.83 -0.0 549,367 - Echvi_0493 0.84 +0.7 549,448 + Echvi_0493 0.87 -0.0 549,490 + Echvi_0493 0.88 -1.2 549,490 + Echvi_0493 0.88 +0.0 549,493 + Echvi_0493 0.89 -0.4 549,493 + Echvi_0493 0.89 +0.2 549,493 + Echvi_0493 0.89 -0.3 549,494 - Echvi_0493 0.89 +1.2 549,494 - Echvi_0493 0.89 -0.2 549,494 - Echvi_0493 0.89 -0.5 549,499 + Echvi_0493 0.89 -0.8 549,529 - Echvi_0493 0.90 +0.2 549,573 + +0.3 549,627 + -0.9 549,627 + -0.8 549,782 - +0.2 549,790 + +0.0 549,818 - +1.0 549,845 + +1.7 549,859 + +0.5 549,872 + -0.2 549,872 + +0.5 550,034 - -0.4 550,039 + +0.3 550,065 - -0.2 550,129 + +0.4 550,130 - +0.9 550,236 - +1.4 550,247 + Echvi_0494 0.14 -1.1 550,290 - Echvi_0494 0.18 -3.1 550,458 + Echvi_0494 0.33 +1.5 550,459 - Echvi_0494 0.33 -0.8 550,459 - Echvi_0494 0.33 -1.6 550,499 + Echvi_0494 0.36 +2.7 550,501 + Echvi_0494 0.36 +0.6 550,502 - Echvi_0494 0.37 -2.2 550,521 - Echvi_0494 0.38 +0.9 550,521 - Echvi_0494 0.38 -0.7 550,583 - Echvi_0494 0.44 -0.6 550,583 - Echvi_0494 0.44 -1.1 550,616 + Echvi_0494 0.46 +1.0 550,617 - Echvi_0494 0.47 -0.5 550,631 - Echvi_0494 0.48 -0.2 550,641 - Echvi_0494 0.49 +0.2 550,650 - Echvi_0494 0.49 +0.1 550,653 + Echvi_0494 0.50 -0.3 550,653 + Echvi_0494 0.50 +0.3 550,653 + Echvi_0494 0.50 -0.1 550,654 - Echvi_0494 0.50 +0.9 550,703 + Echvi_0494 0.54 -0.1 550,744 + Echvi_0494 0.58 +1.2 550,745 - Echvi_0494 0.58 +0.9 550,810 + Echvi_0494 0.63 -0.7
Or see this region's nucleotide sequence