Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2220

Experiment: m.b. Lomefloxacin 0.0125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Lomefloxacin 0.0125 mM
2,644,307	-		Echvi_2218	0.44	+0.1
2,644,470	-		Echvi_2218	0.71	+0.0
2,644,661	-				+0.1
2,644,663	-				-0.0
2,644,682	-				-0.6
2,644,722	+				-2.5
2,644,739	+				-1.1
2,644,740	-				+1.3
2,644,837	+		Echvi_2219	0.29	+0.2
2,644,962	-		Echvi_2219	0.54	+0.7
2,644,971	-		Echvi_2219	0.56	+0.3
2,645,096	+		Echvi_2219	0.80	+0.0
2,645,196	+				+0.3
2,645,196	+				+1.4
2,645,197	-				-1.6
2,645,215	+				+0.5
2,645,215	+				+0.1
2,645,229	+				+0.1
2,645,229	+				+1.7
2,645,230	-				-0.5
2,645,349	+				-0.7
2,645,350	-				-0.1
2,645,350	-				-1.5
2,645,350	-				-1.1
2,645,355	+				-1.3
2,645,356	-				+0.2
2,645,375	-		Echvi_2220	0.11	-0.1
2,645,492	-		Echvi_2220	0.19	+2.3
2,645,511	+		Echvi_2220	0.21	-1.6
2,645,521	-		Echvi_2220	0.21	-0.6
2,645,680	+		Echvi_2220	0.32	-1.5
2,645,708	+		Echvi_2220	0.34	-0.6
2,645,708	+		Echvi_2220	0.34	+0.7
2,645,708	+		Echvi_2220	0.34	-1.8
2,645,709	-		Echvi_2220	0.34	-2.0
2,645,709	-		Echvi_2220	0.34	-0.8
2,645,779	+		Echvi_2220	0.39	-0.4
2,645,856	+		Echvi_2220	0.45	-2.0
2,645,857	-		Echvi_2220	0.45	-1.4
2,645,861	+		Echvi_2220	0.45	-1.6
2,645,863	+		Echvi_2220	0.45	+0.5
2,645,863	+		Echvi_2220	0.45	-0.9
2,645,863	+		Echvi_2220	0.45	-1.5
2,645,864	-		Echvi_2220	0.45	-0.3
2,645,919	+		Echvi_2220	0.49	-1.2
2,645,947	-		Echvi_2220	0.51	-1.0
2,645,967	-		Echvi_2220	0.52	-1.3
2,645,984	-		Echvi_2220	0.54	-0.6
2,645,989	+		Echvi_2220	0.54	-1.5
2,645,989	+		Echvi_2220	0.54	-0.6
2,645,989	+		Echvi_2220	0.54	-2.0
2,645,990	-		Echvi_2220	0.54	-2.2
2,645,990	-		Echvi_2220	0.54	-0.6
2,645,998	+		Echvi_2220	0.55	-0.8
2,645,998	+		Echvi_2220	0.55	-1.3
2,645,998	+		Echvi_2220	0.55	-0.3
2,646,021	+		Echvi_2220	0.56	-0.2
2,646,021	+		Echvi_2220	0.56	-2.1
2,646,021	+		Echvi_2220	0.56	-1.3
2,646,022	-		Echvi_2220	0.56	+1.1
2,646,037	-		Echvi_2220	0.57	-0.4
2,646,052	+		Echvi_2220	0.58	-1.6
2,646,053	-		Echvi_2220	0.58	-1.4
2,646,054	+		Echvi_2220	0.59	-1.1
2,646,061	+		Echvi_2220	0.59	-1.4
2,646,062	-		Echvi_2220	0.59	-1.2
2,646,062	-		Echvi_2220	0.59	+0.3
2,646,064	-		Echvi_2220	0.59	-0.8
2,646,064	-		Echvi_2220	0.59	-0.4
2,646,064	-		Echvi_2220	0.59	-0.3
2,646,086	-		Echvi_2220	0.61	-0.3
2,646,136	+		Echvi_2220	0.64	-0.4
2,646,136	+		Echvi_2220	0.64	-0.5
2,646,136	+		Echvi_2220	0.64	-1.6
2,646,137	-		Echvi_2220	0.64	-0.5
2,646,137	-		Echvi_2220	0.64	-0.5
2,646,137	-		Echvi_2220	0.64	-3.0
2,646,137	-		Echvi_2220	0.64	+0.1
2,646,138	+		Echvi_2220	0.64	-3.5
2,646,138	+		Echvi_2220	0.64	+0.7
2,646,138	+		Echvi_2220	0.64	-0.3
2,646,139	-		Echvi_2220	0.64	-1.1
2,646,142	+		Echvi_2220	0.65	-2.0
2,646,142	+		Echvi_2220	0.65	-0.3
2,646,142	+		Echvi_2220	0.65	-1.4
2,646,142	+		Echvi_2220	0.65	-0.6
2,646,142	+		Echvi_2220	0.65	-0.4
2,646,142	+		Echvi_2220	0.65	-0.6
2,646,143	-		Echvi_2220	0.65	-1.5
2,646,143	-		Echvi_2220	0.65	+2.7
2,646,143	-		Echvi_2220	0.65	-0.7
2,646,143	-		Echvi_2220	0.65	+0.1
2,646,144	+		Echvi_2220	0.65	-0.4
2,646,145	-		Echvi_2220	0.65	+0.1
2,646,202	-		Echvi_2220	0.69	-0.1
2,646,202	-		Echvi_2220	0.69	-0.8
2,646,226	+		Echvi_2220	0.71	-0.6
2,646,227	-		Echvi_2220	0.71	-0.5
2,646,262	-		Echvi_2220	0.73	-0.9
2,646,299	+		Echvi_2220	0.76	-1.5
2,646,299	+		Echvi_2220	0.76	+1.0
2,646,300	-		Echvi_2220	0.76	+0.7
2,646,309	+		Echvi_2220	0.76	+0.1
2,646,310	-		Echvi_2220	0.76	-0.8
2,646,317	-		Echvi_2220	0.77	-2.0
2,646,317	-		Echvi_2220	0.77	+0.0
2,646,317	-		Echvi_2220	0.77	-1.0
2,646,339	+		Echvi_2220	0.79	-0.3
2,646,339	+		Echvi_2220	0.79	-0.4
2,646,362	-		Echvi_2220	0.80	+1.0
2,646,436	+		Echvi_2220	0.85	-0.1
2,646,483	+		Echvi_2220	0.89	-0.5
2,646,483	+		Echvi_2220	0.89	-0.5
2,646,530	-				-1.6
2,646,530	-				+1.0
2,646,553	-				-0.3
2,646,560	-				+0.1
2,646,560	-				+1.4
2,646,560	-				+0.1
2,646,574	+				-1.1
2,646,655	-				+0.2
2,646,674	-				+0.8
2,646,674	-				-1.1
2,646,693	+				-0.7
2,646,717	+				+0.4
2,646,797	+				+0.0
2,646,804	-				-0.2
2,646,804	-				+0.4
2,646,804	-				+0.7
2,646,804	-				-0.6
2,646,804	-				+0.5
2,646,808	-				-0.2
2,646,860	+				+1.0
2,646,903	-		Echvi_2221	0.18	-0.3
2,646,939	-		Echvi_2221	0.27	-0.1
2,646,998	+		Echvi_2221	0.41	-0.9
2,646,998	+		Echvi_2221	0.41	+0.3
2,646,998	+		Echvi_2221	0.41	+1.8
2,646,999	-		Echvi_2221	0.41	+0.2
2,647,154	+		Echvi_2221	0.78	-0.2
2,647,154	+		Echvi_2221	0.78	+1.5
2,647,163	+		Echvi_2221	0.80	+0.6
2,647,172	-		Echvi_2221	0.82	+1.7
2,647,211	-				-0.1
2,647,245	+				+0.4
2,647,245	+				+0.3
2,647,250	+				+0.3
2,647,250	+				-0.3
2,647,250	+				+0.7
2,647,250	+				+0.7
2,647,251	-				-0.1
2,647,251	-				-0.4
2,647,251	-				+0.1
2,647,251	-				+0.2
2,647,251	-				-0.9
2,647,251	-				+0.6
2,647,251	-				+0.1
2,647,264	+				-1.3
2,647,265	-				-0.6
2,647,275	+				-0.4
2,647,346	-		Echvi_2222	0.29	-0.3
2,647,371	+		Echvi_2222	0.43	-0.5
2,647,371	+		Echvi_2222	0.43	-2.3
2,647,372	-		Echvi_2222	0.44	+0.7
2,647,399	+		Echvi_2222	0.59	-0.1
2,647,486	+				+0.1
2,647,487	-				+2.0
2,647,487	-				+1.1
2,647,489	+				+1.1
2,647,542	-				-0.0
2,647,587	-		Echvi_2223	0.23	-0.3
2,647,592	-		Echvi_2223	0.25	+1.5
2,647,615	+		Echvi_2223	0.32	-0.0
2,647,631	+		Echvi_2223	0.37	-0.0
2,647,631	+		Echvi_2223	0.37	-1.6
2,647,634	-		Echvi_2223	0.38	-0.8