Experiment: m.b. Lomefloxacin 0.0125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0679 and Echvi_0680 are separated by 355 nucleotides Echvi_0680 and Echvi_0681 are separated by 1 nucleotides
Echvi_0679: Echvi_0679 - hypothetical protein, at 763,257 to 764,255
_0679
Echvi_0680: Echvi_0680 - RND family efflux transporter, MFP subunit, at 764,611 to 765,693
_0680
Echvi_0681: Echvi_0681 - Cation/multidrug efflux pump, at 765,695 to 768,757
_0681
Position (kb) 764
765
766 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 763.659 kb on + strand, within Echvi_0679 at 763.660 kb on - strand, within Echvi_0679 at 763.660 kb on - strand, within Echvi_0679 at 763.662 kb on + strand, within Echvi_0679 at 763.662 kb on + strand, within Echvi_0679 at 763.663 kb on - strand, within Echvi_0679 at 763.663 kb on - strand, within Echvi_0679 at 763.663 kb on - strand, within Echvi_0679 at 763.678 kb on + strand, within Echvi_0679 at 763.679 kb on - strand, within Echvi_0679 at 763.694 kb on - strand, within Echvi_0679 at 763.694 kb on - strand, within Echvi_0679 at 763.718 kb on + strand, within Echvi_0679 at 763.738 kb on - strand, within Echvi_0679 at 763.739 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.862 kb on - strand, within Echvi_0679 at 763.862 kb on - strand, within Echvi_0679 at 763.862 kb on - strand, within Echvi_0679 at 763.862 kb on - strand, within Echvi_0679 at 763.926 kb on + strand, within Echvi_0679 at 763.926 kb on + strand, within Echvi_0679 at 763.926 kb on + strand, within Echvi_0679 at 763.926 kb on + strand, within Echvi_0679 at 763.927 kb on - strand, within Echvi_0679 at 763.950 kb on + strand, within Echvi_0679 at 763.950 kb on + strand, within Echvi_0679 at 763.950 kb on + strand, within Echvi_0679 at 763.951 kb on - strand, within Echvi_0679 at 763.994 kb on + strand, within Echvi_0679 at 764.046 kb on + strand, within Echvi_0679 at 764.047 kb on - strand, within Echvi_0679 at 764.103 kb on + strand, within Echvi_0679 at 764.103 kb on + strand, within Echvi_0679 at 764.231 kb on + strand at 764.231 kb on + strand at 764.305 kb on + strand at 764.329 kb on - strand at 764.352 kb on - strand at 764.388 kb on - strand at 764.392 kb on + strand at 764.416 kb on + strand at 764.568 kb on - strand at 764.590 kb on + strand at 764.591 kb on - strand at 764.630 kb on + strand at 764.640 kb on - strand at 764.676 kb on - strand at 764.687 kb on + strand at 764.688 kb on - strand at 764.931 kb on + strand, within Echvi_0680 at 764.986 kb on + strand, within Echvi_0680 at 764.987 kb on - strand, within Echvi_0680 at 765.049 kb on + strand, within Echvi_0680 at 765.049 kb on + strand, within Echvi_0680 at 765.050 kb on - strand, within Echvi_0680 at 765.050 kb on - strand, within Echvi_0680 at 765.070 kb on + strand, within Echvi_0680 at 765.071 kb on - strand, within Echvi_0680 at 765.071 kb on - strand, within Echvi_0680 at 765.071 kb on - strand, within Echvi_0680 at 765.075 kb on + strand, within Echvi_0680 at 765.076 kb on - strand, within Echvi_0680 at 765.150 kb on - strand, within Echvi_0680 at 765.150 kb on - strand, within Echvi_0680 at 765.210 kb on + strand, within Echvi_0680 at 765.210 kb on + strand, within Echvi_0680 at 765.211 kb on - strand, within Echvi_0680 at 765.211 kb on - strand, within Echvi_0680 at 765.338 kb on - strand, within Echvi_0680 at 765.459 kb on - strand, within Echvi_0680 at 765.459 kb on - strand, within Echvi_0680 at 765.644 kb on + strand at 765.644 kb on + strand at 765.644 kb on + strand at 765.705 kb on + strand at 765.706 kb on - strand at 765.714 kb on + strand at 765.714 kb on + strand at 765.714 kb on + strand at 765.715 kb on - strand at 765.715 kb on - strand at 765.721 kb on + strand at 765.722 kb on - strand at 765.848 kb on + strand at 765.848 kb on + strand at 765.849 kb on - strand at 765.849 kb on - strand at 765.849 kb on - strand at 765.849 kb on - strand at 765.849 kb on - strand at 765.852 kb on + strand at 765.852 kb on + strand at 765.853 kb on - strand at 765.917 kb on - strand at 765.968 kb on - strand at 765.997 kb on + strand at 765.997 kb on + strand at 766.109 kb on - strand, within Echvi_0681 at 766.114 kb on - strand, within Echvi_0681 at 766.171 kb on + strand, within Echvi_0681 at 766.172 kb on - strand, within Echvi_0681 at 766.306 kb on - strand, within Echvi_0681 at 766.312 kb on + strand, within Echvi_0681 at 766.375 kb on - strand, within Echvi_0681 at 766.448 kb on - strand, within Echvi_0681 at 766.573 kb on + strand, within Echvi_0681 at 766.574 kb on - strand, within Echvi_0681 at 766.574 kb on - strand, within Echvi_0681 at 766.579 kb on + strand, within Echvi_0681 at 766.579 kb on + strand, within Echvi_0681 at 766.584 kb on + strand, within Echvi_0681 at 766.584 kb on + strand, within Echvi_0681 at 766.605 kb on + strand, within Echvi_0681 at 766.638 kb on + strand, within Echvi_0681 at 766.639 kb on - strand, within Echvi_0681 at 766.639 kb on - strand, within Echvi_0681 at 766.639 kb on - strand, within Echvi_0681 at 766.664 kb on - strand, within Echvi_0681 at 766.670 kb on + strand, within Echvi_0681 at 766.670 kb on + strand, within Echvi_0681 at 766.671 kb on - strand, within Echvi_0681 at 766.673 kb on - strand, within Echvi_0681
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.0125 mM remove 763,659 + Echvi_0679 0.40 -0.3 763,660 - Echvi_0679 0.40 -0.2 763,660 - Echvi_0679 0.40 +1.2 763,662 + Echvi_0679 0.41 +0.3 763,662 + Echvi_0679 0.41 -0.6 763,663 - Echvi_0679 0.41 -0.5 763,663 - Echvi_0679 0.41 -1.1 763,663 - Echvi_0679 0.41 -0.4 763,678 + Echvi_0679 0.42 -2.2 763,679 - Echvi_0679 0.42 +0.5 763,694 - Echvi_0679 0.44 -1.2 763,694 - Echvi_0679 0.44 -0.6 763,718 + Echvi_0679 0.46 +0.5 763,738 - Echvi_0679 0.48 -0.8 763,739 + Echvi_0679 0.48 +1.7 763,861 + Echvi_0679 0.60 +1.1 763,861 + Echvi_0679 0.60 +1.2 763,861 + Echvi_0679 0.60 -0.9 763,861 + Echvi_0679 0.60 +1.1 763,861 + Echvi_0679 0.60 +0.6 763,861 + Echvi_0679 0.60 +0.0 763,861 + Echvi_0679 0.60 +0.9 763,862 - Echvi_0679 0.61 -0.2 763,862 - Echvi_0679 0.61 -0.2 763,862 - Echvi_0679 0.61 +0.2 763,862 - Echvi_0679 0.61 +1.7 763,926 + Echvi_0679 0.67 +0.6 763,926 + Echvi_0679 0.67 +1.0 763,926 + Echvi_0679 0.67 +1.7 763,926 + Echvi_0679 0.67 +1.3 763,927 - Echvi_0679 0.67 -0.6 763,950 + Echvi_0679 0.69 +0.4 763,950 + Echvi_0679 0.69 +1.7 763,950 + Echvi_0679 0.69 +2.9 763,951 - Echvi_0679 0.69 +0.5 763,994 + Echvi_0679 0.74 +1.6 764,046 + Echvi_0679 0.79 +1.6 764,047 - Echvi_0679 0.79 -0.5 764,103 + Echvi_0679 0.85 +2.5 764,103 + Echvi_0679 0.85 +1.9 764,231 + +2.7 764,231 + +1.6 764,305 + +2.3 764,329 - -2.8 764,352 - +0.3 764,388 - -1.5 764,392 + +3.0 764,416 + +2.3 764,568 - -0.2 764,590 + +2.2 764,591 - +0.8 764,630 + -2.2 764,640 - +0.4 764,676 - -1.2 764,687 + -0.1 764,688 - +1.1 764,931 + Echvi_0680 0.30 -2.0 764,986 + Echvi_0680 0.35 -0.6 764,987 - Echvi_0680 0.35 -2.8 765,049 + Echvi_0680 0.40 +0.1 765,049 + Echvi_0680 0.40 -0.7 765,050 - Echvi_0680 0.41 -1.0 765,050 - Echvi_0680 0.41 -2.6 765,070 + Echvi_0680 0.42 -1.1 765,071 - Echvi_0680 0.42 -2.5 765,071 - Echvi_0680 0.42 -1.1 765,071 - Echvi_0680 0.42 -0.5 765,075 + Echvi_0680 0.43 +1.3 765,076 - Echvi_0680 0.43 -0.1 765,150 - Echvi_0680 0.50 -2.7 765,150 - Echvi_0680 0.50 -2.1 765,210 + Echvi_0680 0.55 -0.8 765,210 + Echvi_0680 0.55 -1.6 765,211 - Echvi_0680 0.55 +1.0 765,211 - Echvi_0680 0.55 -0.6 765,338 - Echvi_0680 0.67 +0.6 765,459 - Echvi_0680 0.78 -1.1 765,459 - Echvi_0680 0.78 +0.1 765,644 + -0.8 765,644 + -0.3 765,644 + -3.0 765,705 + -1.4 765,706 - -2.2 765,714 + -1.5 765,714 + +1.0 765,714 + -3.7 765,715 - -0.3 765,715 - -1.3 765,721 + -1.4 765,722 - -0.8 765,848 + -0.9 765,848 + -0.1 765,849 - +2.1 765,849 - -1.9 765,849 - -2.9 765,849 - -1.2 765,849 - +0.1 765,852 + -1.6 765,852 + -1.6 765,853 - -1.0 765,917 - -1.1 765,968 - -2.1 765,997 + -0.2 765,997 + +0.1 766,109 - Echvi_0681 0.14 -0.6 766,114 - Echvi_0681 0.14 -2.2 766,171 + Echvi_0681 0.16 -1.6 766,172 - Echvi_0681 0.16 -0.6 766,306 - Echvi_0681 0.20 -2.3 766,312 + Echvi_0681 0.20 -1.1 766,375 - Echvi_0681 0.22 -1.8 766,448 - Echvi_0681 0.25 -1.2 766,573 + Echvi_0681 0.29 -1.3 766,574 - Echvi_0681 0.29 -1.0 766,574 - Echvi_0681 0.29 -2.7 766,579 + Echvi_0681 0.29 -1.4 766,579 + Echvi_0681 0.29 +0.2 766,584 + Echvi_0681 0.29 -0.6 766,584 + Echvi_0681 0.29 -1.2 766,605 + Echvi_0681 0.30 -1.2 766,638 + Echvi_0681 0.31 -0.5 766,639 - Echvi_0681 0.31 +0.9 766,639 - Echvi_0681 0.31 -1.2 766,639 - Echvi_0681 0.31 -1.8 766,664 - Echvi_0681 0.32 -1.3 766,670 + Echvi_0681 0.32 -0.5 766,670 + Echvi_0681 0.32 -2.2 766,671 - Echvi_0681 0.32 -0.5 766,673 - Echvi_0681 0.32 -1.7
Or see this region's nucleotide sequence