Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4048

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
4,852,361	+		Echvi_4046	0.56	-0.0
4,852,362	-		Echvi_4046	0.56	+0.4
4,852,362	-		Echvi_4046	0.56	-0.3
4,852,362	-		Echvi_4046	0.56	+0.6
4,852,396	+		Echvi_4046	0.59	+0.2
4,852,403	+		Echvi_4046	0.59	-0.1
4,852,440	+		Echvi_4046	0.62	+0.6
4,852,443	-		Echvi_4046	0.62	+0.2
4,852,452	-		Echvi_4046	0.63	+0.1
4,852,589	+		Echvi_4046	0.74	-2.1
4,852,595	+		Echvi_4046	0.75	+0.4
4,852,595	+		Echvi_4046	0.75	-0.3
4,852,595	+		Echvi_4046	0.75	-2.0
4,852,743	-		Echvi_4046	0.87	+0.0
4,852,743	-		Echvi_4046	0.87	-1.3
4,852,807	+				+1.1
4,852,807	+				+0.6
4,852,808	-				-0.6
4,852,808	-				-0.0
4,852,808	-				-0.7
4,852,809	+				-0.0
4,852,810	-				+1.5
4,852,810	-				-0.2
4,852,810	-				+1.1
4,852,810	-				-0.3
4,852,810	-				-0.7
4,852,811	+				-1.0
4,852,812	-				+2.3
4,852,812	-				-0.9
4,852,812	-				-0.7
4,852,812	-				+0.1
4,852,867	-				-1.0
4,853,140	-		Echvi_4047	0.34	-0.1
4,853,169	-		Echvi_4047	0.49	+0.4
4,853,193	+		Echvi_4047	0.62	-0.2
4,853,194	-		Echvi_4047	0.62	+0.5
4,853,212	+		Echvi_4047	0.71	+0.8
4,853,295	+				-0.6
4,853,295	+				-0.7
4,853,318	+				-0.5
4,853,318	+				+0.5
4,853,384	-		Echvi_4048	0.19	-0.8
4,853,578	+				-0.5
4,853,593	+				-1.6
4,853,684	+		Echvi_4049	0.27	+1.1
4,853,685	-		Echvi_4049	0.27	-0.3
4,853,702	-		Echvi_4049	0.31	-0.8
4,853,726	+		Echvi_4049	0.36	+0.6
4,853,774	-		Echvi_4049	0.47	-0.4
4,853,774	-		Echvi_4049	0.47	-0.3
4,853,774	-		Echvi_4049	0.47	-0.1
4,853,794	+		Echvi_4049	0.51	-0.3
4,853,795	-		Echvi_4049	0.52	-0.1
4,853,805	+		Echvi_4049	0.54	+1.7
4,853,871	+		Echvi_4049	0.68	+0.5
4,853,949	-				+3.7
4,854,003	+				-1.8
4,854,011	+				+0.2
4,854,011	+				+0.7
4,854,011	+				-0.2
4,854,011	+				-0.2
4,854,011	+				-0.7
4,854,012	-				-0.1
4,854,014	+				+0.3
4,854,014	+				+0.3
4,854,014	+				+0.1
4,854,014	+				-0.7
4,854,091	+				-2.6
4,854,463	-		Echvi_4050	0.13	-0.3