Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3874

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
4,628,739	+		Echvi_3872	0.65	+0.6
4,628,747	-		Echvi_3872	0.67	+0.1
4,628,824	-		Echvi_3872	0.88	-0.1
4,628,834	-				-1.0
4,628,881	-				-0.4
4,628,881	-				-1.6
4,628,888	+				+0.0
4,628,889	-				-1.2
4,628,893	+				+0.1
4,628,997	+				+0.6
4,628,998	-				-0.7
4,629,012	-		Echvi_3873	0.10	+1.4
4,629,054	+		Echvi_3873	0.16	+0.1
4,629,069	+		Echvi_3873	0.18	+0.6
4,629,138	+		Echvi_3873	0.28	-0.2
4,629,138	+		Echvi_3873	0.28	+1.6
4,629,227	+		Echvi_3873	0.40	+0.3
4,629,228	-		Echvi_3873	0.40	+0.6
4,629,228	-		Echvi_3873	0.40	+1.6
4,629,228	-		Echvi_3873	0.40	+0.2
4,629,232	+		Echvi_3873	0.40	-0.8
4,629,233	-		Echvi_3873	0.41	-0.8
4,629,233	-		Echvi_3873	0.41	+0.2
4,629,233	-		Echvi_3873	0.41	-1.1
4,629,290	-		Echvi_3873	0.48	-0.6
4,629,300	-		Echvi_3873	0.50	-1.2
4,629,300	-		Echvi_3873	0.50	+0.6
4,629,309	-		Echvi_3873	0.51	+0.3
4,629,416	-		Echvi_3873	0.65	-2.1
4,629,416	-		Echvi_3873	0.65	+1.3
4,629,417	+		Echvi_3873	0.66	-0.7
4,629,418	-		Echvi_3873	0.66	-0.9
4,629,491	+		Echvi_3873	0.76	+0.2
4,629,491	+		Echvi_3873	0.76	+0.4
4,629,501	-		Echvi_3873	0.77	-0.1
4,629,585	-		Echvi_3873	0.88	+1.1
4,629,592	-		Echvi_3873	0.89	+0.4
4,629,683	-				-1.6
4,629,683	-				+0.6
4,629,684	+				+0.0
4,629,684	+				+1.1
4,629,685	-				-0.3
4,629,686	+				+0.3
4,629,686	+				-0.4
4,629,686	+				+0.4
4,629,686	+				+0.4
4,629,686	+				+0.6
4,629,686	+				-0.1
4,629,686	+				+0.6
4,629,687	-				-1.0
4,629,687	-				-0.2
4,629,687	-				+0.2
4,629,687	-				+0.3
4,629,687	-				+0.6
4,629,690	+				-0.9
4,629,710	+				+0.0
4,629,710	+				+0.5
4,629,710	+				+0.0
4,629,711	-				-1.0
4,629,752	-				+0.3
4,629,759	-				+1.6
4,629,901	+		Echvi_3874	0.25	-0.7
4,629,928	+		Echvi_3874	0.28	-0.4
4,630,014	+		Echvi_3874	0.39	-0.1
4,630,024	+		Echvi_3874	0.40	+0.2
4,630,029	+		Echvi_3874	0.41	-0.9
4,630,037	+		Echvi_3874	0.42	+0.5
4,630,037	+		Echvi_3874	0.42	-0.1
4,630,103	-		Echvi_3874	0.50	-0.2
4,630,116	+		Echvi_3874	0.51	+0.2
4,630,128	+		Echvi_3874	0.53	-0.9
4,630,175	-		Echvi_3874	0.59	-0.5
4,630,175	-		Echvi_3874	0.59	-0.3
4,630,175	-		Echvi_3874	0.59	-0.1
4,630,245	-		Echvi_3874	0.67	-0.4
4,630,273	+		Echvi_3874	0.71	-1.9
4,630,273	+		Echvi_3874	0.71	-0.4
4,630,273	+		Echvi_3874	0.71	-0.2
4,630,364	+		Echvi_3874	0.82	-0.0
4,630,368	+		Echvi_3874	0.83	-0.6
4,630,368	+		Echvi_3874	0.83	-0.0
4,630,368	+		Echvi_3874	0.83	-1.1
4,630,369	-		Echvi_3874	0.83	+0.5
4,630,369	-		Echvi_3874	0.83	+0.1
4,630,369	-		Echvi_3874	0.83	+0.1
4,630,396	-		Echvi_3874	0.86	-0.1
4,630,396	-		Echvi_3874	0.86	-0.1
4,630,464	+				-0.8
4,630,509	+				-1.8
4,630,515	-				-0.2
4,630,515	-				-0.3
4,630,538	+				+0.0
4,630,538	+				-0.6
4,630,545	+				+0.1
4,630,546	-				-0.5
4,630,635	+				-0.1
4,630,668	+				+0.5
4,630,679	+		Echvi_3875	0.11	-0.0
4,630,712	+		Echvi_3875	0.16	-0.2
4,630,712	+		Echvi_3875	0.16	+1.8
4,630,713	-		Echvi_3875	0.16	-0.0
4,630,713	-		Echvi_3875	0.16	-0.9
4,630,713	-		Echvi_3875	0.16	-0.1
4,630,713	-		Echvi_3875	0.16	+2.2
4,630,734	-		Echvi_3875	0.20	-0.2
4,630,769	+		Echvi_3875	0.25	+0.7
4,630,769	+		Echvi_3875	0.25	-0.8
4,630,769	+		Echvi_3875	0.25	-1.2
4,630,770	-		Echvi_3875	0.25	-1.2
4,630,836	+		Echvi_3875	0.36	-0.7
4,630,837	-		Echvi_3875	0.36	-0.1
4,630,837	-		Echvi_3875	0.36	-0.5
4,630,837	-		Echvi_3875	0.36	-0.7
4,630,908	+		Echvi_3875	0.47	-0.9
4,630,932	+		Echvi_3875	0.51	-0.6
4,630,935	+		Echvi_3875	0.52	+0.1
4,630,972	-		Echvi_3875	0.57	-1.5
4,630,972	-		Echvi_3875	0.57	-0.6
4,631,025	+		Echvi_3875	0.66	+1.1
4,631,026	-		Echvi_3875	0.66	-1.3
4,631,037	+		Echvi_3875	0.68	-0.1
4,631,058	+		Echvi_3875	0.71	-0.4
4,631,058	+		Echvi_3875	0.71	+1.2
4,631,058	+		Echvi_3875	0.71	+0.1
4,631,058	+		Echvi_3875	0.71	+0.4
4,631,058	+		Echvi_3875	0.71	-0.2
4,631,059	-		Echvi_3875	0.71	+0.4
4,631,059	-		Echvi_3875	0.71	+1.1
4,631,059	-		Echvi_3875	0.71	+0.4
4,631,059	-		Echvi_3875	0.71	+0.2
4,631,059	-		Echvi_3875	0.71	+0.1
4,631,059	-		Echvi_3875	0.71	-0.7
4,631,059	-		Echvi_3875	0.71	+0.2
4,631,059	-		Echvi_3875	0.71	+0.4
4,631,059	-		Echvi_3875	0.71	+0.9
4,631,177	+		Echvi_3875	0.90	-0.5
4,631,178	-				-0.4
4,631,188	-				+0.5
4,631,188	-				+0.1
4,631,188	-				-1.0
4,631,331	+		Echvi_3876	0.14	+0.5
4,631,332	-		Echvi_3876	0.14	+0.1
4,631,332	-		Echvi_3876	0.14	-0.7
4,631,335	+		Echvi_3876	0.15	-0.7
4,631,336	-		Echvi_3876	0.15	-1.2
4,631,341	+		Echvi_3876	0.16	-0.7
4,631,347	+		Echvi_3876	0.18	-2.7
4,631,353	+		Echvi_3876	0.19	-0.4
4,631,353	+		Echvi_3876	0.19	-0.4
4,631,353	+		Echvi_3876	0.19	-0.6
4,631,353	+		Echvi_3876	0.19	+0.6
4,631,353	+		Echvi_3876	0.19	+0.5
4,631,353	+		Echvi_3876	0.19	-0.3
4,631,358	-		Echvi_3876	0.21	-0.5
4,631,359	+		Echvi_3876	0.21	+0.1
4,631,360	-		Echvi_3876	0.21	-0.4
4,631,383	+		Echvi_3876	0.27	-0.4
4,631,384	-		Echvi_3876	0.28	+0.6
4,631,398	+		Echvi_3876	0.31	+0.8
4,631,399	-		Echvi_3876	0.32	-1.4
4,631,466	+		Echvi_3876	0.50	+0.4
4,631,467	-		Echvi_3876	0.50	+0.1