Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3715

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
4,419,111	+				+0.1
4,419,111	+				+0.1
4,419,191	-				-1.5
4,419,193	+				+0.6
4,419,224	+				+0.6
4,419,224	+				+0.2
4,419,269	+				+0.0
4,419,336	-				+0.6
4,419,336	-				-0.5
4,419,339	+				+0.1
4,419,339	+				-0.8
4,419,340	-				-2.1
4,419,360	+				-1.2
4,419,360	+				+0.7
4,419,369	+				+1.3
4,419,370	-				+3.2
4,419,370	-				-0.0
4,419,405	+		Echvi_3714	0.12	+0.1
4,419,406	-		Echvi_3714	0.13	-0.4
4,419,406	-		Echvi_3714	0.13	+0.8
4,419,406	-		Echvi_3714	0.13	+0.1
4,419,406	-		Echvi_3714	0.13	+0.9
4,419,406	-		Echvi_3714	0.13	+0.2
4,419,430	+		Echvi_3714	0.17	-0.6
4,419,430	+		Echvi_3714	0.17	-1.0
4,419,441	-		Echvi_3714	0.18	-0.0
4,419,447	+		Echvi_3714	0.19	-0.4
4,419,447	+		Echvi_3714	0.19	+0.1
4,419,448	-		Echvi_3714	0.19	-0.0
4,419,448	-		Echvi_3714	0.19	-0.5
4,419,492	+		Echvi_3714	0.27	-0.4
4,419,501	-		Echvi_3714	0.28	-0.2
4,419,535	-		Echvi_3714	0.34	+0.2
4,419,568	+		Echvi_3714	0.39	-0.9
4,419,568	+		Echvi_3714	0.39	-0.0
4,419,568	+		Echvi_3714	0.39	-0.1
4,419,568	+		Echvi_3714	0.39	-1.0
4,419,574	+		Echvi_3714	0.40	-0.4
4,419,576	+		Echvi_3714	0.40	-0.4
4,419,577	-		Echvi_3714	0.41	+0.4
4,419,620	+		Echvi_3714	0.48	-0.4
4,419,620	+		Echvi_3714	0.48	+0.2
4,419,621	-		Echvi_3714	0.48	+1.4
4,419,621	-		Echvi_3714	0.48	-0.8
4,419,624	+		Echvi_3714	0.48	-0.1
4,419,624	+		Echvi_3714	0.48	+1.2
4,419,624	+		Echvi_3714	0.48	+0.1
4,419,624	+		Echvi_3714	0.48	-0.4
4,419,625	-		Echvi_3714	0.48	-0.6
4,419,625	-		Echvi_3714	0.48	-0.1
4,419,625	-		Echvi_3714	0.48	-0.7
4,419,625	-		Echvi_3714	0.48	+0.1
4,419,625	-		Echvi_3714	0.48	+0.5
4,419,625	-		Echvi_3714	0.48	-1.2
4,419,625	-		Echvi_3714	0.48	-0.6
4,419,625	-		Echvi_3714	0.48	-0.4
4,419,625	-		Echvi_3714	0.48	-0.4
4,419,642	+		Echvi_3714	0.51	-1.3
4,419,690	+		Echvi_3714	0.59	-1.1
4,419,691	-		Echvi_3714	0.59	-0.3
4,419,691	-		Echvi_3714	0.59	-0.0
4,419,691	-		Echvi_3714	0.59	-1.7
4,419,691	-		Echvi_3714	0.59	+1.0
4,419,691	-		Echvi_3714	0.59	-0.5
4,419,725	+		Echvi_3714	0.65	+0.2
4,419,726	-		Echvi_3714	0.65	-0.9
4,419,753	+		Echvi_3714	0.69	-0.7
4,419,757	+		Echvi_3714	0.70	-0.4
4,419,758	-		Echvi_3714	0.70	+0.2
4,419,758	-				+0.1
4,419,758	-		Echvi_3714	0.70	+0.3
4,419,817	-		Echvi_3714	0.80	-1.9
4,419,817	-		Echvi_3714	0.80	+0.5
4,419,903	-				+1.1
4,419,949	+				-0.4
4,420,041	+				-0.7
4,420,041	+				-0.2
4,420,045	+				+0.1
4,420,045	+				-0.1
4,420,045	+				-1.2
4,420,045	+				+0.7
4,420,045	+				-0.7
4,420,045	+				+0.3
4,420,046	-				-1.2
4,420,046	-				+0.5
4,420,046	-				-0.9
4,420,046	-				-0.4
4,420,046	-				+0.3
4,420,046	-				+0.7
4,420,046	-				-0.2
4,420,048	+				-0.3
4,420,049	-				-0.3
4,420,129	+				-0.0
4,420,404	+		Echvi_3715	0.35	+0.1
4,420,405	-		Echvi_3715	0.35	-2.4
4,420,405	-		Echvi_3715	0.35	+0.1
4,420,721	-		Echvi_3715	0.67	-1.3
4,420,882	+		Echvi_3715	0.83	+0.8
4,420,882	+		Echvi_3715	0.83	-0.7
4,420,954	-				-1.6
4,420,967	+				+0.6
4,420,967	+				+0.2
4,421,034	-				-0.2
4,421,040	-				+0.6
4,421,067	+				-0.9
4,421,089	+				+0.8
4,421,206	+				-0.2
4,421,416	-		Echvi_3716	0.34	+0.1
4,421,779	-		Echvi_3716	0.81	-0.1
4,421,899	+				-0.5
4,421,900	-				+1.6
4,421,942	-				+0.5
4,421,952	-				+0.1
4,421,953	+				+0.2
4,421,953	+				-0.2
4,421,954	-				-0.5
4,421,954	-				-0.4
4,421,955	+				-1.2
4,421,955	+				+0.3
4,421,962	+				+0.2
4,422,033	-				+0.1
4,422,046	+				+1.1
4,422,046	+				-1.6