Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3565

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
4,223,570	+		Echvi_3563	0.79	+0.0
4,223,570	+		Echvi_3563	0.79	+0.1
4,223,571	-		Echvi_3563	0.79	+0.5
4,223,572	+		Echvi_3563	0.79	+1.8
4,223,572	+		Echvi_3563	0.79	-1.1
4,223,572	+		Echvi_3563	0.79	-1.5
4,223,573	+		Echvi_3563	0.79	+1.0
4,223,573	-		Echvi_3563	0.79	+0.9
4,223,740	+				-1.6
4,223,777	+				+0.1
4,223,788	+				+0.7
4,223,788	+				+1.6
4,223,788	+				+0.5
4,223,789	-				-0.3
4,223,789	-				-0.5
4,223,796	+				-0.3
4,223,808	+				+1.1
4,223,809	-				+0.4
4,224,094	+		Echvi_3564	0.38	+0.8
4,224,149	+		Echvi_3564	0.45	+0.8
4,224,258	+		Echvi_3564	0.60	+0.2
4,224,259	-		Echvi_3564	0.60	+0.3
4,224,332	+		Echvi_3564	0.69	-1.2
4,224,396	-		Echvi_3564	0.77	+1.1
4,224,505	+				-0.9
4,224,506	-				+0.3
4,224,506	-				-1.2
4,224,531	-				+1.8
4,224,550	+				+0.3
4,224,568	+				-1.1
4,224,569	-				+1.2
4,224,579	-				-0.0
4,224,597	+				-0.3
4,224,600	+				+1.3
4,224,611	+				-0.6
4,224,611	+				-0.0
4,224,614	+		Echvi_3565	0.10	-0.7
4,224,615	-		Echvi_3565	0.10	-0.7
4,224,615	-		Echvi_3565	0.10	-0.1
4,224,690	+		Echvi_3565	0.22	+0.0
4,224,700	-		Echvi_3565	0.23	+1.0
4,224,747	-		Echvi_3565	0.31	-0.2
4,224,766	-		Echvi_3565	0.33	-0.6
4,224,775	-		Echvi_3565	0.35	-0.2
4,224,776	+		Echvi_3565	0.35	-0.6
4,224,784	-		Echvi_3565	0.36	+0.0
4,224,829	+		Echvi_3565	0.43	-0.2
4,224,857	+		Echvi_3565	0.48	-1.9
4,224,870	-		Echvi_3565	0.50	-0.8
4,224,995	+		Echvi_3565	0.69	-1.6
4,225,016	-		Echvi_3565	0.72	-0.7
4,225,016	-		Echvi_3565	0.72	+1.6
4,225,176	+				-0.8
4,225,177	-				-0.0
4,225,197	+				-0.1
4,225,197	+				-0.3
4,225,199	+				-1.0
4,225,199	+				+0.2
4,225,200	-				-1.5
4,225,200	-				+0.9
4,225,246	+				-0.2
4,225,454	+		Echvi_3566	0.43	+0.6
4,225,454	+		Echvi_3566	0.43	+2.3
4,225,454	+		Echvi_3566	0.43	-0.0
4,225,454	+		Echvi_3566	0.43	+1.0
4,225,454	+		Echvi_3566	0.43	-0.7
4,225,469	+		Echvi_3566	0.46	-1.5
4,225,484	-		Echvi_3566	0.48	-0.3
4,225,562	-		Echvi_3566	0.62	+0.1
4,225,632	+		Echvi_3566	0.73	-1.2
4,225,633	-		Echvi_3566	0.74	-0.7
4,225,664	+		Echvi_3566	0.79	+0.2
4,225,694	+		Echvi_3566	0.84	+0.4
4,225,799	-				-0.2
4,225,923	+				+0.1
4,225,924	-				-0.2
4,226,024	-		Echvi_3567	0.13	-0.9