Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3562

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
4,220,580	-		Echvi_3560	0.54	+0.5
4,220,580	-		Echvi_3560	0.54	+0.7
4,220,580	-		Echvi_3560	0.54	-0.8
4,220,601	+		Echvi_3560	0.59	+1.3
4,220,602	-		Echvi_3560	0.59	-1.5
4,220,667	+		Echvi_3560	0.76	-1.0
4,220,668	-		Echvi_3560	0.76	+0.5
4,220,668	-		Echvi_3560	0.76	+0.1
4,220,668	-		Echvi_3560	0.76	+0.2
4,220,669	+		Echvi_3560	0.76	-2.0
4,220,670	-		Echvi_3560	0.77	-1.6
4,220,676	+		Echvi_3560	0.78	-0.1
4,220,676	+		Echvi_3560	0.78	-0.3
4,220,677	-		Echvi_3560	0.78	-0.1
4,220,711	+		Echvi_3560	0.87	-0.3
4,220,711	+		Echvi_3560	0.87	+0.0
4,220,711	+		Echvi_3560	0.87	-0.2
4,220,711	+		Echvi_3560	0.87	+0.0
4,220,712	-		Echvi_3560	0.87	-1.8
4,220,716	-		Echvi_3560	0.88	-0.5
4,220,716	-		Echvi_3560	0.88	+1.0
4,220,716	-		Echvi_3560	0.88	-0.2
4,220,744	+				-0.2
4,220,744	+				+0.3
4,220,744	+				+0.6
4,220,745	-				-0.7
4,220,745	-				-1.9
4,220,747	+				-0.1
4,220,748	-				-0.1
4,220,773	+				+0.1
4,220,778	+				-1.0
4,220,779	-				-0.9
4,220,799	+				-1.3
4,220,847	+				-0.8
4,220,876	-				+0.4
4,220,895	+				+0.6
4,220,896	-				+0.4
4,220,896	-				-1.0
4,220,983	+		Echvi_3561	0.13	-1.6
4,220,989	+		Echvi_3561	0.14	+1.8
4,221,058	+		Echvi_3561	0.31	+1.3
4,221,058	+		Echvi_3561	0.31	-0.3
4,221,059	-		Echvi_3561	0.31	-0.5
4,221,065	-		Echvi_3561	0.32	+0.1
4,221,082	-		Echvi_3561	0.36	-0.6
4,221,148	+		Echvi_3561	0.52	+0.1
4,221,148	+		Echvi_3561	0.52	-0.8
4,221,148	+		Echvi_3561	0.52	-0.3
4,221,167	-		Echvi_3561	0.57	-1.4
4,221,176	-		Echvi_3561	0.59	-0.5
4,221,208	+		Echvi_3561	0.67	-0.4
4,221,209	-		Echvi_3561	0.67	+0.4
4,221,209	-		Echvi_3561	0.67	-0.0
4,221,229	+		Echvi_3561	0.72	+0.8
4,221,229	+		Echvi_3561	0.72	-2.0
4,221,229	+		Echvi_3561	0.72	-1.6
4,221,229	+		Echvi_3561	0.72	-1.0
4,221,230	-		Echvi_3561	0.72	+0.2
4,221,443	-				-1.0
4,221,448	+				+0.5
4,221,448	+				+0.1
4,221,472	+				+0.1
4,221,479	+				-0.6
4,221,536	+				-0.8
4,221,544	-				+0.7
4,221,567	-				+1.3
4,221,714	-		Echvi_3562	0.21	+0.6
4,221,853	-		Echvi_3562	0.36	+0.1
4,221,881	-		Echvi_3562	0.39	-0.4
4,221,890	+		Echvi_3562	0.40	-0.4
4,222,014	-		Echvi_3562	0.53	+1.5
4,222,058	-		Echvi_3562	0.57	+1.0
4,222,124	+		Echvi_3562	0.64	-0.0
4,222,125	-		Echvi_3562	0.64	-1.6
4,222,149	+		Echvi_3562	0.67	-0.4
4,222,149	+		Echvi_3562	0.67	-0.0
4,222,162	-		Echvi_3562	0.68	+1.0
4,222,205	+		Echvi_3562	0.72	-0.7
4,222,206	-		Echvi_3562	0.73	+0.0
4,222,206	-		Echvi_3562	0.73	-0.2
4,222,235	+		Echvi_3562	0.76	+0.0
4,222,236	-		Echvi_3562	0.76	+0.6
4,222,236	-		Echvi_3562	0.76	+0.4
4,222,267	+		Echvi_3562	0.79	-0.1
4,222,267	+		Echvi_3562	0.79	+0.8
4,222,330	+		Echvi_3562	0.86	+0.4
4,222,332	+		Echvi_3562	0.86	-1.0
4,222,333	-		Echvi_3562	0.86	-0.9
4,222,365	-		Echvi_3562	0.89	+1.4
4,222,386	+				+2.2
4,222,387	-				-0.4
4,222,387	-				+0.1
4,222,424	+				+0.7
4,222,424	+				-1.2
4,222,427	+				+0.1
4,222,427	+				-0.7
4,222,429	+				+0.1
4,222,429	+				+0.0
4,222,429	+				+0.1
4,222,429	+				-0.9
4,222,430	-				+0.6
4,222,430	-				-0.3
4,222,451	-				+0.0
4,222,501	+				-0.9
4,222,501	+				+0.3
4,222,502	-				+0.9
4,222,502	-				-0.4
4,222,506	-				+0.0
4,222,524	-				+0.2
4,222,601	-				+0.2
4,222,649	-				-0.3
4,222,649	-				-0.0
4,222,670	+				+1.6
4,222,670	+				+0.7
4,222,670	+				+0.6
4,222,671	-				+0.2
4,222,866	+		Echvi_3563	0.16	+0.6
4,222,866	+		Echvi_3563	0.16	+1.0
4,222,866	+		Echvi_3563	0.16	-3.2
4,222,866	+		Echvi_3563	0.16	+0.7
4,222,867	-		Echvi_3563	0.16	+1.3
4,222,946	-		Echvi_3563	0.23	-0.0
4,222,998	+		Echvi_3563	0.28	-0.4
4,223,048	+		Echvi_3563	0.32	-1.0
4,223,048	+		Echvi_3563	0.32	-0.6
4,223,048	+		Echvi_3563	0.32	-0.5
4,223,049	-		Echvi_3563	0.32	+0.1
4,223,064	-		Echvi_3563	0.34	+0.3
4,223,074	+		Echvi_3563	0.35	+0.0
4,223,134	+		Echvi_3563	0.40	-0.1
4,223,240	+		Echvi_3563	0.49	-0.8
4,223,241	-		Echvi_3563	0.50	+0.2
4,223,244	+		Echvi_3563	0.50	-1.2
4,223,244	+		Echvi_3563	0.50	+0.1
4,223,245	-		Echvi_3563	0.50	-0.5
4,223,255	+		Echvi_3563	0.51	-0.4
4,223,255	+		Echvi_3563	0.51	-1.3
4,223,255	+		Echvi_3563	0.51	+0.1
4,223,255	+		Echvi_3563	0.51	+0.4
4,223,255	+		Echvi_3563	0.51	+1.6
4,223,256	-		Echvi_3563	0.51	-0.9
4,223,256	-		Echvi_3563	0.51	+0.4
4,223,256	-		Echvi_3563	0.51	-1.1
4,223,256	-		Echvi_3563	0.51	-1.0
4,223,280	+		Echvi_3563	0.53	+0.1
4,223,390	+		Echvi_3563	0.63	+0.6
4,223,391	-		Echvi_3563	0.63	-0.0
4,223,462	-		Echvi_3563	0.69	-0.9
4,223,462	-		Echvi_3563	0.69	+0.2