Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3347

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
3,950,271	+		Echvi_3346	0.40	+0.6
3,950,271	+		Echvi_3346	0.40	-0.4
3,950,272	-		Echvi_3346	0.40	+0.7
3,950,300	+		Echvi_3346	0.44	-0.1
3,950,313	+		Echvi_3346	0.45	-0.0
3,950,367	+		Echvi_3346	0.52	-0.3
3,950,396	-		Echvi_3346	0.55	-0.6
3,950,417	+		Echvi_3346	0.58	+0.8
3,950,418	-		Echvi_3346	0.58	-0.7
3,950,443	-		Echvi_3346	0.61	-0.6
3,950,519	+		Echvi_3346	0.70	+0.6
3,950,519	+		Echvi_3346	0.70	+1.1
3,950,522	+		Echvi_3346	0.71	+0.3
3,950,531	+		Echvi_3346	0.72	+0.3
3,950,538	+		Echvi_3346	0.73	-0.0
3,950,538	+		Echvi_3346	0.73	+0.6
3,950,539	-		Echvi_3346	0.73	+1.1
3,950,556	-		Echvi_3346	0.75	-1.3
3,950,566	+		Echvi_3346	0.76	-0.9
3,950,566	+		Echvi_3346	0.76	-0.6
3,950,567	-		Echvi_3346	0.76	+0.2
3,950,592	+		Echvi_3346	0.79	-1.4
3,950,603	+		Echvi_3346	0.80	-0.3
3,950,603	+		Echvi_3346	0.80	-0.5
3,950,604	-		Echvi_3346	0.81	-0.1
3,950,641	-		Echvi_3346	0.85	-0.6
3,950,641	-		Echvi_3346	0.85	+1.2
3,950,646	+		Echvi_3346	0.86	-0.1
3,950,647	-		Echvi_3346	0.86	-0.4
3,950,658	-		Echvi_3346	0.87	-0.0
3,950,688	+				-0.2
3,950,689	-				-0.2
3,950,690	+				+0.6
3,950,690	+				-0.5
3,950,691	-				+0.1
3,950,691	-				-0.7
3,950,691	-				-0.3
3,950,691	-				-0.2
3,950,708	-				-0.4
3,950,708	-				-0.1
3,950,778	+				-0.2
3,950,789	+				-0.9
3,950,810	-				+0.6
3,950,930	+				-0.1
3,950,931	-				+0.1
3,950,943	+				+0.7
3,950,977	+				+0.3
3,950,977	+				-0.8
3,950,977	+				-0.6
3,950,988	+				+0.1
3,951,008	+				+0.1
3,951,165	+				+1.4
3,951,165	+				+0.9
3,951,166	-				+1.3
3,951,173	-				+0.2
3,951,174	+				+0.6
3,951,174	+				+0.6
3,951,175	-				-1.5
3,951,175	-				-0.2
3,951,294	+				-0.1
3,951,294	+				+0.2
3,951,294	+				+0.5
3,951,294	+				-0.7
3,951,294	+				-1.1
3,951,294	+				+0.5
3,951,294	+				+0.5
3,951,294	+				-0.2
3,951,294	+				-0.4
3,951,294	+				+0.4
3,951,295	-				+0.7
3,951,295	-				+0.7
3,951,295	-				-0.2
3,951,295	-				-0.3
3,951,295	-				+1.2
3,951,295	-				-0.2
3,951,295	-				-1.7
3,951,296	+				+1.3
3,951,296	+				-0.7
3,951,296	+				-0.3
3,951,296	+				+0.3
3,951,296	+				+0.4
3,951,296	+				+0.1
3,951,296	+				+1.0
3,951,296	+				+0.4
3,951,297	-				+1.2
3,951,297	-				+1.0
3,951,297	-				-0.1
3,951,298	+				-0.6
3,951,298	+				-0.0
3,951,298	+				-1.6
3,951,298	+				+0.2
3,951,298	+				-0.6
3,951,299	-				+0.3
3,951,299	-				+1.6
3,951,363	-		Echvi_3347	0.32	-1.1
3,951,568	-				-1.1
3,951,659	+				+0.7
3,951,659	+				-0.2
3,951,659	+				-2.0
3,951,659	+				-1.4
3,951,682	-				+0.1
3,951,682	-				+0.7
3,951,682	-				-1.7
3,951,905	-		Echvi_3348	0.14	-0.9
3,951,905	-		Echvi_3348	0.14	+0.8
3,951,905	-		Echvi_3348	0.14	+0.4
3,951,972	+		Echvi_3348	0.19	-0.0
3,952,257	+		Echvi_3348	0.43	+0.2
3,952,257	+		Echvi_3348	0.43	-0.6
3,952,260	-		Echvi_3348	0.43	+0.3
3,952,314	+		Echvi_3348	0.48	+0.3
3,952,336	+		Echvi_3348	0.49	+0.3
3,952,336	+		Echvi_3348	0.49	-1.0
3,952,337	-		Echvi_3348	0.49	-0.9
3,952,411	-		Echvi_3348	0.56	+0.6
3,952,497	+		Echvi_3348	0.63	+1.6
3,952,550	+		Echvi_3348	0.67	-0.8
3,952,559	+		Echvi_3348	0.68	+0.7