Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2917

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
3,491,416	+		Echvi_2916	0.27	-0.3
3,491,417	-		Echvi_2916	0.27	-1.0
3,491,447	+		Echvi_2916	0.31	-0.9
3,491,447	+		Echvi_2916	0.31	+0.6
3,491,454	+		Echvi_2916	0.31	-0.2
3,491,454	+		Echvi_2916	0.31	+1.0
3,491,458	+		Echvi_2916	0.32	+0.7
3,491,458	+		Echvi_2916	0.32	-0.3
3,491,458	+		Echvi_2916	0.32	+1.4
3,491,459	-		Echvi_2916	0.32	-0.6
3,491,459	-		Echvi_2916	0.32	+0.2
3,491,525	+		Echvi_2916	0.40	+0.4
3,491,525	+		Echvi_2916	0.40	-0.9
3,491,526	-		Echvi_2916	0.41	-0.2
3,491,620	+		Echvi_2916	0.52	+0.4
3,491,675	+		Echvi_2916	0.59	-0.4
3,491,676	-		Echvi_2916	0.59	-0.2
3,491,686	-		Echvi_2916	0.61	+1.2
3,491,689	+		Echvi_2916	0.61	-0.8
3,491,690	-		Echvi_2916	0.61	+0.6
3,491,690	-		Echvi_2916	0.61	+1.0
3,491,690	-		Echvi_2916	0.61	-0.8
3,491,690	-		Echvi_2916	0.61	-0.6
3,491,764	-		Echvi_2916	0.71	-2.2
3,491,768	+		Echvi_2916	0.71	-0.3
3,491,768	+		Echvi_2916	0.71	-1.4
3,491,768	+		Echvi_2916	0.71	+0.2
3,491,768	+		Echvi_2916	0.71	-0.0
3,491,770	+		Echvi_2916	0.71	+0.4
3,491,770	+		Echvi_2916	0.71	+1.5
3,491,771	-		Echvi_2916	0.71	-1.5
3,491,771	-		Echvi_2916	0.71	-0.2
3,491,772	+		Echvi_2916	0.72	-0.9
3,491,772	+		Echvi_2916	0.72	-0.2
3,491,772	+		Echvi_2916	0.72	-0.7
3,491,772	+		Echvi_2916	0.72	+0.1
3,491,773	-		Echvi_2916	0.72	+0.9
3,491,773	-		Echvi_2916	0.72	-0.6
3,491,781	+		Echvi_2916	0.73	+0.1
3,491,850	+		Echvi_2916	0.81	-0.3
3,491,871	-		Echvi_2916	0.84	-0.6
3,491,882	-		Echvi_2916	0.85	-1.8
3,491,949	-				+0.3
3,491,949	-				+0.3
3,491,994	+				-0.2
3,491,997	+				+0.5
3,492,007	+				-0.9
3,492,039	+				+0.1
3,492,040	-				+0.5
3,492,059	-				-1.0
3,492,069	+				-0.2
3,492,145	-				-0.3
3,492,145	-				-0.8
3,492,197	+				+0.6
3,492,209	+				+0.2
3,492,236	+				-0.6
3,492,236	+				+0.1
3,492,374	+		Echvi_2917	0.35	-0.4
3,492,423	+		Echvi_2917	0.46	-0.8
3,492,424	-		Echvi_2917	0.47	+0.0
3,492,458	-		Echvi_2917	0.54	-0.6
3,492,458	-		Echvi_2917	0.54	-0.5
3,492,458	-		Echvi_2917	0.54	-0.6
3,492,461	+		Echvi_2917	0.55	-1.0
3,492,462	-		Echvi_2917	0.55	-1.2
3,492,462	-		Echvi_2917	0.55	-1.0
3,492,522	-		Echvi_2917	0.69	+0.6
3,492,617	-				-0.2
3,492,638	-				+0.9
3,492,663	+				-0.3
3,492,706	+				-0.5
3,492,719	-				+1.0
3,492,788	-				-0.2
3,492,795	+				+0.6
3,492,796	-				-0.7
3,492,814	+				-1.2
3,492,815	-				-1.5
3,492,871	+				-0.3
3,492,872	-				-0.6
3,492,872	-				+2.2
3,492,896	-				+0.1
3,492,917	-				+1.2
3,492,917	-				+0.3
3,492,917	-				+1.1
3,492,918	+				+0.4
3,492,919	-				+0.6
3,492,919	-				-0.5
3,492,919	-				-0.4
3,492,946	+				-0.0
3,492,946	+				-0.6
3,492,947	-				-0.7
3,492,947	-				-1.1
3,492,948	+				+0.0
3,492,948	+				+0.4
3,492,948	+				+1.0
3,492,948	+				+0.5
3,492,949	-				-1.4
3,492,977	-				-1.5
3,492,977	-				-0.1
3,493,015	-				+0.1
3,493,037	-				-0.6
3,493,141	-				-0.8
3,493,163	+				-1.2
3,493,195	-				-1.0
3,493,228	-				+0.2
3,493,254	+				-1.2
3,493,255	-				-0.2
3,493,299	+				-0.1
3,493,416	+		Echvi_2918	0.24	+0.6
3,493,427	+		Echvi_2918	0.25	-0.2
3,493,451	+		Echvi_2918	0.29	+0.5
3,493,451	+		Echvi_2918	0.29	+0.4
3,493,455	-		Echvi_2918	0.30	-0.1
3,493,488	+		Echvi_2918	0.35	+0.0
3,493,489	-		Echvi_2918	0.35	+0.4
3,493,504	+		Echvi_2918	0.37	-0.2
3,493,505	-		Echvi_2918	0.38	+0.2
3,493,528	+		Echvi_2918	0.41	-0.2
3,493,541	+		Echvi_2918	0.43	-0.4
3,493,547	-		Echvi_2918	0.44	+0.6
3,493,576	+		Echvi_2918	0.49	-0.5
3,493,577	-		Echvi_2918	0.49	+0.3
3,493,581	+		Echvi_2918	0.49	-0.6
3,493,582	-		Echvi_2918	0.50	-0.0