Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2773

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
3,312,823	+				+0.3
3,312,837	+				+0.5
3,312,838	-				+0.1
3,312,844	+				+0.1
3,312,862	+				+0.1
3,312,863	-				+0.3
3,312,863	-				+0.1
3,312,863	-				-0.3
3,312,878	+				-0.4
3,312,878	+				-0.7
3,312,878	+				-0.0
3,312,879	-				-0.7
3,312,879	-				+0.1
3,312,879	-				-1.3
3,312,988	+				-1.4
3,313,004	-				+0.1
3,313,013	+				-0.0
3,313,037	+				+0.1
3,313,048	+				+0.1
3,313,049	-				+0.7
3,313,050	+				-0.1
3,313,073	-				-1.9
3,313,076	+				-0.4
3,313,094	+				-0.3
3,313,094	+				+0.7
3,313,094	+				+0.3
3,313,105	-				+0.9
3,313,111	+				-0.1
3,313,111	+				+1.1
3,313,112	-				-0.5
3,313,182	-				-0.4
3,313,203	+				-0.8
3,313,203	+				-0.2
3,313,204	-				-0.4
3,313,227	+				-0.9
3,313,227	+				-0.2
3,313,228	-				+1.7
3,313,229	+				+0.7
3,313,243	-				-0.1
3,313,250	+				+1.4
3,313,251	-				+0.5
3,313,251	-				-0.2
3,313,251	-				-0.3
3,313,262	-				+1.2
3,313,262	-				+0.2
3,313,265	-				-0.8
3,313,267	-				-0.3
3,313,283	-				+0.1
3,313,283	-				+0.4
3,313,289	+				-0.3
3,313,289	+				-1.0
3,313,411	-		Echvi_2772	0.19	+0.7
3,313,413	-		Echvi_2772	0.19	-1.3
3,313,444	+		Echvi_2772	0.26	+1.4
3,313,504	+		Echvi_2772	0.39	-0.3
3,313,639	+		Echvi_2772	0.69	-0.7
3,313,640	-		Echvi_2772	0.69	-0.0
3,313,814	+				-1.8
3,313,820	+				+0.2
3,313,826	+				-0.9
3,313,826	+				+0.1
3,313,826	+				-1.2
3,313,826	+				+0.7
3,313,826	+				-0.7
3,313,887	-		Echvi_2773	0.17	+0.3
3,314,029	+		Echvi_2773	0.54	-1.2
3,314,029	+		Echvi_2773	0.54	-0.2
3,314,030	-		Echvi_2773	0.54	-0.0
3,314,062	+		Echvi_2773	0.62	+0.0
3,314,062	+		Echvi_2773	0.62	-0.8
3,314,134	+		Echvi_2773	0.81	-1.2
3,314,160	-		Echvi_2773	0.87	-1.5
3,314,211	+				-1.3
3,314,211	+				-1.3
3,314,211	+				+2.2
3,314,211	+				-0.8
3,314,212	-				-0.6
3,314,212	-				+0.2
3,314,212	-				+1.5
3,314,213	+				-1.9
3,314,214	-				-0.9
3,314,215	+				+0.6
3,314,215	+				-0.4
3,314,291	-				+1.7
3,314,345	-		Echvi_2774	0.18	-0.3
3,314,369	+		Echvi_2774	0.23	-0.1
3,314,370	-		Echvi_2774	0.23	-0.2
3,314,376	+		Echvi_2774	0.24	-1.2
3,314,379	+		Echvi_2774	0.25	+0.9
3,314,379	+		Echvi_2774	0.25	-0.7
3,314,424	+		Echvi_2774	0.33	-0.7
3,314,451	+		Echvi_2774	0.38	-0.1
3,314,452	-		Echvi_2774	0.38	-0.3
3,314,463	+		Echvi_2774	0.40	+1.4
3,314,463	+		Echvi_2774	0.40	-1.1
3,314,463	+		Echvi_2774	0.40	-0.1
3,314,464	-		Echvi_2774	0.40	+0.5
3,314,467	+		Echvi_2774	0.41	-0.1
3,314,468	-		Echvi_2774	0.41	+0.5
3,314,573	+		Echvi_2774	0.60	+0.0
3,314,577	+		Echvi_2774	0.61	+0.1
3,314,578	-		Echvi_2774	0.61	-0.1
3,314,578	-		Echvi_2774	0.61	-0.2
3,314,600	+		Echvi_2774	0.65	-0.7
3,314,601	-		Echvi_2774	0.65	+0.1
3,314,603	+		Echvi_2774	0.65	-0.7
3,314,664	-		Echvi_2774	0.77	-0.3
3,314,684	+		Echvi_2774	0.80	-0.1
3,314,685	-		Echvi_2774	0.80	-0.3
3,314,687	+		Echvi_2774	0.81	-0.2
3,314,687	+		Echvi_2774	0.81	-0.6
3,314,688	-		Echvi_2774	0.81	-0.2
3,314,688	-		Echvi_2774	0.81	+0.3
3,314,689	+		Echvi_2774	0.81	-1.9
3,314,689	+		Echvi_2774	0.81	+0.3
3,314,784	+				+0.7
3,314,798	-				-0.1
3,314,821	-				+0.4
3,314,826	+				+0.6
3,314,844	-				-0.2
3,314,844	-				-0.6
3,314,849	-				+0.5
3,314,892	-				-0.8
3,314,911	-				-0.5
3,314,919	+				-0.1
3,314,924	+				+0.2
3,314,970	+				-1.7
3,314,971	-				-1.2
3,314,972	+				-0.3
3,314,972	+				+0.2
3,314,972	+				-0.3
3,314,973	-				+1.2
3,314,981	+				+0.4
3,315,005	+				-0.3
3,315,005	+				+0.1
3,315,006	-				+0.7
3,315,006	-				+0.6
3,315,006	-				+2.2
3,315,007	+				+0.3
3,315,007	+				+0.2
3,315,012	+				+0.6
3,315,012	+				+0.3
3,315,012	+				+0.3
3,315,013	-				-0.2
3,315,015	+				+0.5
3,315,016	-				-0.7
3,315,058	+				-0.3
3,315,058	+				+0.2
3,315,204	-		Echvi_2775	0.23	+0.5