Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2521

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
2,992,115	-		Echvi_2520	0.61	+0.1
2,992,115	-		Echvi_2520	0.61	+1.3
2,992,186	-		Echvi_2520	0.66	-1.0
2,992,258	-		Echvi_2520	0.71	-1.5
2,992,258	-		Echvi_2520	0.71	+0.8
2,992,288	-		Echvi_2520	0.74	-1.0
2,992,288	-		Echvi_2520	0.74	+0.1
2,992,307	+		Echvi_2520	0.75	+0.6
2,992,341	+		Echvi_2520	0.78	-0.0
2,992,342	-		Echvi_2520	0.78	+1.0
2,992,444	+		Echvi_2520	0.85	-0.4
2,992,444	+		Echvi_2520	0.85	-0.3
2,992,525	-				+1.2
2,992,537	+				+0.7
2,992,552	+				-0.1
2,992,566	+				-0.4
2,992,566	+				-0.3
2,992,566	+				-1.1
2,992,566	+				+0.4
2,992,567	-				-0.8
2,992,567	-				+2.2
2,992,567	-				+0.7
2,992,574	+				-0.6
2,992,583	+				-0.3
2,992,584	-				-1.6
2,992,595	+				+0.5
2,992,606	-				+0.2
2,992,606	-				+0.4
2,992,667	-				+0.1
2,992,708	+				-0.3
2,992,709	-				-0.2
2,992,767	-				-1.2
2,992,767	-				-0.0
2,992,795	+				-0.0
2,992,843	+				-0.3
2,992,859	-				-0.3
2,992,881	+				-0.4
2,992,881	+				+0.2
2,992,882	-				-1.1
2,992,895	-				-0.7
2,992,943	-				+1.1
2,992,980	+				-1.6
2,992,990	+				-1.2
2,992,994	+				+0.5
2,992,994	+				+1.1
2,992,994	+				+0.9
2,992,994	+				-1.0
2,992,995	-				-0.4
2,993,008	-				-0.5
2,993,039	+				-0.7
2,993,051	+				-0.3
2,993,058	+				-0.0
2,993,063	+				+1.1
2,993,090	-				+0.9
2,993,096	-				+0.0
2,993,180	-		Echvi_2521	0.12	+0.2
2,993,180	-		Echvi_2521	0.12	-0.6
2,993,232	-		Echvi_2521	0.16	-0.3
2,993,232	-		Echvi_2521	0.16	-0.0
2,993,232	-		Echvi_2521	0.16	+0.6
2,993,673	+		Echvi_2521	0.53	+0.6
2,993,700	-		Echvi_2521	0.55	-0.1
2,993,768	+		Echvi_2521	0.61	+0.1
2,993,822	-		Echvi_2521	0.66	-0.3
2,993,846	+		Echvi_2521	0.68	-0.5
2,993,951	+		Echvi_2521	0.76	-1.1
2,993,951	+		Echvi_2521	0.76	-1.7
2,993,952	-		Echvi_2521	0.77	-1.1
2,994,040	+		Echvi_2521	0.84	+1.3
2,994,041	-		Echvi_2521	0.84	-0.2
2,994,041	-		Echvi_2521	0.84	-0.0
2,994,086	-		Echvi_2521	0.88	-0.5
2,994,086	-		Echvi_2521	0.88	-0.1
2,994,154	-				+1.0
2,994,205	-				+1.1
2,994,224	+				+0.5
2,994,255	+				+0.4
2,994,255	+				+1.2
2,994,351	+				+0.6
2,994,352	-				-0.6
2,994,356	+				+0.1
2,994,356	+				+1.7
2,994,356	+				-0.6
2,994,357	-				+0.1
2,994,360	-				+0.7
2,994,360	-				+0.0
2,994,360	-				+1.2
2,994,380	+				+1.5
2,994,381	-				-1.0
2,994,426	+				+0.7
2,994,454	+				-0.1
2,994,455	-				-0.9
2,994,482	+				+0.3
2,994,574	+		Echvi_2522	0.14	+0.8
2,994,727	+		Echvi_2522	0.22	+1.1
2,994,728	-		Echvi_2522	0.22	+0.0
2,994,831	+		Echvi_2522	0.27	+1.7
2,994,831	+		Echvi_2522	0.27	-0.9
2,994,870	+		Echvi_2522	0.29	+0.4
2,995,015	-		Echvi_2522	0.37	-0.3
2,995,015	-		Echvi_2522	0.37	+0.7
2,995,038	-		Echvi_2522	0.38	-2.3
2,995,038	-		Echvi_2522	0.38	-0.5
2,995,104	-		Echvi_2522	0.41	+0.3
2,995,104	-		Echvi_2522	0.41	-0.5