Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2134

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
2,520,659	+		Echvi_2133	0.40	+0.7
2,520,660	-		Echvi_2133	0.40	+0.0
2,520,667	+		Echvi_2133	0.41	+0.6
2,520,668	-		Echvi_2133	0.41	+0.4
2,520,675	-		Echvi_2133	0.41	+0.4
2,520,675	-		Echvi_2133	0.41	+0.0
2,520,715	+		Echvi_2133	0.44	-0.0
2,520,718	-		Echvi_2133	0.44	-0.9
2,520,819	-		Echvi_2133	0.50	+0.2
2,520,819	-		Echvi_2133	0.50	-0.4
2,520,822	-		Echvi_2133	0.51	+0.1
2,520,914	-		Echvi_2133	0.56	-0.3
2,520,928	-		Echvi_2133	0.57	-0.4
2,520,931	-		Echvi_2133	0.57	-0.0
2,520,931	-		Echvi_2133	0.57	+0.1
2,520,931	-		Echvi_2133	0.57	-0.7
2,520,940	-		Echvi_2133	0.58	+0.3
2,520,993	+		Echvi_2133	0.61	+0.3
2,520,993	+		Echvi_2133	0.61	+0.1
2,520,994	-		Echvi_2133	0.61	+0.0
2,520,996	+		Echvi_2133	0.61	-1.4
2,520,997	-		Echvi_2133	0.61	-0.9
2,521,029	+		Echvi_2133	0.63	+1.8
2,521,030	-		Echvi_2133	0.63	-1.2
2,521,107	-		Echvi_2133	0.68	-0.2
2,521,114	-		Echvi_2133	0.69	-0.5
2,521,176	-		Echvi_2133	0.73	-1.0
2,521,284	+		Echvi_2133	0.79	-0.3
2,521,285	-		Echvi_2133	0.79	-1.3
2,521,285	-		Echvi_2133	0.79	-0.4
2,521,285	-		Echvi_2133	0.79	-0.5
2,521,285	-		Echvi_2133	0.79	+0.5
2,521,287	-		Echvi_2133	0.79	-0.7
2,521,287	-		Echvi_2133	0.79	-0.5
2,521,293	+		Echvi_2133	0.80	+0.5
2,521,293	+		Echvi_2133	0.80	+1.2
2,521,293	+		Echvi_2133	0.80	-0.9
2,521,503	+				+1.8
2,521,503	+				+2.4
2,521,504	-				+0.2
2,521,534	+				-0.7
2,521,541	-				-0.9
2,521,552	+				-0.3
2,521,552	+				-0.4
2,521,553	-				-2.3
2,521,553	-				+0.8
2,521,555	-				+0.3
2,521,631	+				-0.4
2,521,631	+				-0.1
2,521,635	+				-0.9
2,521,635	+				+0.0
2,521,636	-				-0.8
2,521,655	-				+0.6
2,521,661	+				+0.0
2,521,677	+				-0.2
2,521,678	-				-0.0
2,521,678	-				-0.1
2,521,699	+				+0.1
2,521,700	-				-0.1
2,521,700	-				-0.8
2,521,744	-		Echvi_2134	0.15	+0.5
2,521,795	-		Echvi_2134	0.23	-0.0
2,521,822	-		Echvi_2134	0.26	-0.8
2,521,903	-		Echvi_2134	0.38	+1.0
2,521,957	+		Echvi_2134	0.45	-0.7
2,521,958	-		Echvi_2134	0.45	+1.2
2,521,960	-		Echvi_2134	0.46	+1.2
2,521,960	-		Echvi_2134	0.46	-0.6
2,521,960	-		Echvi_2134	0.46	-0.3
2,522,070	-		Echvi_2134	0.61	-1.0
2,522,347	+				+0.7
2,522,348	-				+2.2
2,522,348	-				+0.3
2,522,368	+				+0.1
2,522,368	+				-0.2
2,522,369	-				+0.0
2,522,383	+				+0.7
2,522,384	-				+3.8
2,522,385	+				-0.5
2,522,397	+				+0.0
2,522,410	+				-0.2
2,522,424	+				+0.1
2,522,469	+				+0.5
2,522,473	+				-0.2
2,522,530	+				-0.4
2,522,639	+				+0.1
2,522,706	-				-0.3
2,522,752	-				+1.8
2,522,822	-		Echvi_2135	0.13	-0.5
2,522,883	-		Echvi_2135	0.28	+1.0
2,522,929	-		Echvi_2135	0.39	+0.2
2,522,957	-		Echvi_2135	0.46	+0.5