Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2061

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
2,429,401	+		Echvi_2059	0.84	-1.0
2,429,402	-		Echvi_2059	0.84	-0.0
2,429,486	-				+0.8
2,429,677	+				+0.8
2,430,181	-				-2.0
2,430,273	-				+0.2
2,430,324	+				+0.1
2,430,325	-				+0.2
2,430,331	+				+0.6
2,430,331	+				-1.2
2,430,510	+				+1.0
2,430,636	+		Echvi_2061	0.18	-0.1
2,430,637	-		Echvi_2061	0.18	+1.8
2,430,637	-		Echvi_2061	0.18	-1.5
2,430,787	+		Echvi_2061	0.28	-0.8
2,430,806	+		Echvi_2061	0.29	-1.4
2,430,807	-		Echvi_2061	0.29	-0.2
2,430,940	-		Echvi_2061	0.38	+0.7
2,430,940	-		Echvi_2061	0.38	-0.3
2,431,003	-		Echvi_2061	0.42	-1.0
2,431,012	+		Echvi_2061	0.43	-1.6
2,431,013	-		Echvi_2061	0.43	+0.2
2,431,111	-		Echvi_2061	0.49	-1.0
2,431,201	-		Echvi_2061	0.55	-0.3
2,431,201	-		Echvi_2061	0.55	-0.8
2,431,268	+		Echvi_2061	0.60	-2.2
2,431,313	+		Echvi_2061	0.63	+1.8
2,431,313	+		Echvi_2061	0.63	+0.2
2,431,346	-		Echvi_2061	0.65	-0.7
2,431,467	-		Echvi_2061	0.73	-1.3
2,431,467	-		Echvi_2061	0.73	+0.2
2,431,501	+		Echvi_2061	0.75	-1.6
2,431,502	-		Echvi_2061	0.75	-1.4
2,431,502	-		Echvi_2061	0.75	+0.2
2,431,526	+		Echvi_2061	0.77	-1.0
2,431,527	-		Echvi_2061	0.77	-0.7
2,431,637	-		Echvi_2061	0.84	-0.8
2,431,658	+		Echvi_2061	0.85	+0.4
2,431,659	-		Echvi_2061	0.85	+0.2
2,431,659	-		Echvi_2061	0.85	+0.2
2,431,670	-		Echvi_2061	0.86	-0.0
2,431,673	-		Echvi_2061	0.86	-0.4
2,431,763	+				-0.7
2,431,984	-				-1.0
2,432,028	+				+1.3
2,432,222	+		Echvi_2062	0.19	+1.8
2,432,440	+		Echvi_2062	0.39	+0.3
2,432,517	+		Echvi_2062	0.47	+1.1
2,432,754	+		Echvi_2062	0.69	-1.0