Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2056

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
2,423,753	-		Echvi_2055	0.53	-0.7
2,423,758	+		Echvi_2055	0.53	-1.3
2,423,758	+		Echvi_2055	0.53	+0.8
2,423,758	+		Echvi_2055	0.53	+0.1
2,423,759	-		Echvi_2055	0.53	-1.3
2,423,759	-		Echvi_2055	0.53	-1.0
2,423,779	-		Echvi_2055	0.54	+0.6
2,423,826	-		Echvi_2055	0.57	+0.2
2,423,826	-		Echvi_2055	0.57	+1.1
2,423,859	-		Echvi_2055	0.59	-0.1
2,423,859	-		Echvi_2055	0.59	+0.6
2,423,928	+		Echvi_2055	0.63	+2.8
2,423,929	-		Echvi_2055	0.63	-0.7
2,424,172	+		Echvi_2055	0.78	-0.4
2,424,173	-		Echvi_2055	0.78	-0.8
2,424,173	-		Echvi_2055	0.78	+1.4
2,424,173	-		Echvi_2055	0.78	-1.4
2,424,173	-		Echvi_2055	0.78	-1.4
2,424,176	+		Echvi_2055	0.78	-2.0
2,424,176	+		Echvi_2055	0.78	+0.8
2,424,177	-		Echvi_2055	0.78	-1.5
2,424,177	-		Echvi_2055	0.78	+0.6
2,424,229	+		Echvi_2055	0.81	-1.7
2,424,229	+		Echvi_2055	0.81	+1.2
2,424,230	-		Echvi_2055	0.81	-1.7
2,424,271	-		Echvi_2055	0.83	+0.1
2,424,281	-		Echvi_2055	0.84	-0.4
2,424,281	-		Echvi_2055	0.84	+2.1
2,424,281	-		Echvi_2055	0.84	-1.2
2,424,281	-		Echvi_2055	0.84	+0.2
2,424,295	+		Echvi_2055	0.85	-0.7
2,424,296	-		Echvi_2055	0.85	-1.7
2,424,340	-		Echvi_2055	0.87	+0.1
2,424,380	-		Echvi_2055	0.90	-1.3
2,424,497	+				-0.4
2,424,536	-				-1.2
2,424,554	-				+0.2
2,424,557	-				-1.2
2,424,557	-				-0.3
2,424,557	-				-0.0
2,424,570	+				-0.8
2,424,596	-				+0.4
2,424,600	+				+1.2
2,424,646	-				-3.1
2,424,685	-				-0.4
2,424,686	+				-1.0
2,424,687	-				-0.2
2,424,687	-				+1.8
2,424,742	+				-1.9
2,424,798	+				-1.9
2,424,799	-				-0.7
2,424,799	-				-0.8
2,424,811	-				-1.0
2,424,839	-				-0.7
2,424,920	+		Echvi_2056	0.13	-0.9
2,424,939	-		Echvi_2056	0.15	-0.5
2,424,942	-		Echvi_2056	0.15	-0.9
2,425,112	+		Echvi_2056	0.25	-1.5
2,425,113	-		Echvi_2056	0.25	-0.0
2,425,221	+		Echvi_2056	0.31	-0.1
2,425,249	-		Echvi_2056	0.33	-0.1
2,425,323	+		Echvi_2056	0.37	-2.0
2,425,388	+		Echvi_2056	0.41	-1.7
2,425,412	+		Echvi_2056	0.42	+1.8
2,425,412	+		Echvi_2056	0.42	+0.2
2,425,421	-		Echvi_2056	0.43	+1.6
2,425,436	-		Echvi_2056	0.44	-0.5
2,425,485	+		Echvi_2056	0.47	+0.8
2,425,485	+		Echvi_2056	0.47	-1.6
2,425,486	-		Echvi_2056	0.47	-2.7
2,425,496	+		Echvi_2056	0.47	-0.2
2,425,498	+		Echvi_2056	0.47	-0.7
2,425,499	-		Echvi_2056	0.48	-0.5
2,425,499	-		Echvi_2056	0.48	+0.8
2,425,649	-		Echvi_2056	0.56	-1.3
2,425,649	-		Echvi_2056	0.56	-2.9
2,425,874	-		Echvi_2056	0.70	-1.5
2,425,934	-		Echvi_2056	0.73	-2.5
2,425,993	+		Echvi_2056	0.77	+1.4
2,426,015	-		Echvi_2056	0.78	-0.7
2,426,015	-		Echvi_2056	0.78	-1.2
2,426,218	-				+0.8
2,426,222	+				-2.5
2,426,276	+				-0.9
2,426,299	-				-1.4
2,426,311	+				-0.2
2,426,312	-				-0.1
2,426,450	-				-1.3
2,426,450	-				-0.9
2,426,464	+				-0.5
2,426,464	+				-0.7
2,426,465	-				-1.0
2,426,465	-				-2.6
2,426,465	-				+0.8
2,426,465	-				-0.6
2,426,465	-				+0.2
2,426,466	+				-0.7
2,426,467	-				-1.7
2,426,467	-				+1.0
2,426,467	-				-1.5
2,426,469	+				+0.2
2,426,469	+				-0.9
2,426,469	+				-1.3
2,426,469	+				-2.0
2,426,470	-				+0.7
2,426,470	-				-0.6
2,426,472	+				+1.4
2,426,472	+				-0.8
2,426,472	+				+1.2
2,426,477	-				-1.8
2,426,480	-				-1.5
2,426,480	-				-1.1
2,426,480	-				-0.1
2,426,491	-				-1.8
2,426,513	-				-1.6
2,426,555	-		Echvi_2057	0.11	-0.6
2,426,561	-		Echvi_2057	0.12	+1.2
2,426,591	-		Echvi_2057	0.18	-0.5
2,426,592	+		Echvi_2057	0.18	+0.8
2,426,592	+		Echvi_2057	0.18	-1.2
2,426,593	-		Echvi_2057	0.18	-0.2
2,426,593	-		Echvi_2057	0.18	-0.7
2,426,593	-		Echvi_2057	0.18	-1.4
2,426,593	-		Echvi_2057	0.18	+1.5
2,426,593	-		Echvi_2057	0.18	-2.8
2,426,635	+		Echvi_2057	0.27	+1.2
2,426,732	-		Echvi_2057	0.46	-0.4
2,426,751	-		Echvi_2057	0.50	-0.4
2,426,823	-		Echvi_2057	0.64	-1.0
2,426,834	-		Echvi_2057	0.66	+1.4
2,426,859	+		Echvi_2057	0.71	-2.1
2,426,860	-		Echvi_2057	0.71	-1.0
2,427,050	+				+1.8
2,427,050	+				-0.7
2,427,174	+		Echvi_2058	0.15	-0.1
2,427,196	-		Echvi_2058	0.17	-0.9
2,427,288	+		Echvi_2058	0.26	-0.4
2,427,288	+		Echvi_2058	0.26	+0.5
2,427,288	+		Echvi_2058	0.26	-0.2
2,427,336	+		Echvi_2058	0.31	-1.3