Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2002

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
2,353,092	-		Echvi_2001	0.19	+0.2
2,353,136	-		Echvi_2001	0.24	-1.6
2,353,142	+		Echvi_2001	0.25	+0.8
2,353,168	-		Echvi_2001	0.27	-0.2
2,353,378	-		Echvi_2001	0.50	-0.8
2,353,378	-				+0.5
2,353,378	-		Echvi_2001	0.50	-1.3
2,353,378	-		Echvi_2001	0.50	-0.4
2,353,423	-		Echvi_2001	0.55	-1.0
2,353,423	-		Echvi_2001	0.55	-0.2
2,353,423	-		Echvi_2001	0.55	-0.7
2,353,477	+		Echvi_2001	0.60	-0.0
2,353,477	+		Echvi_2001	0.60	-0.2
2,353,511	+		Echvi_2001	0.64	+0.8
2,353,512	-		Echvi_2001	0.64	-0.9
2,353,552	-		Echvi_2001	0.68	-0.8
2,353,655	-		Echvi_2001	0.79	-1.3
2,353,709	+		Echvi_2001	0.85	+0.2
2,353,709	+		Echvi_2001	0.85	+0.3
2,353,709	+		Echvi_2001	0.85	-0.6
2,353,754	-				-0.4
2,353,765	+				+0.8
2,353,797	+				-1.4
2,353,797	+				+0.6
2,353,797	+				-0.1
2,353,798	-				-1.4
2,353,811	-				+1.6
2,353,815	-				-0.5
2,353,827	+				-0.7
2,353,827	+				+0.7
2,353,828	-				+1.8
2,353,828	-				-1.3
2,353,845	+				-1.0
2,353,846	-				-0.0
2,353,846	-				-1.7
2,353,864	-				+0.2
2,353,937	-				-0.5
2,353,937	-				-0.1
2,353,937	-				-0.8
2,353,937	-				-1.4
2,353,937	-				-0.6
2,353,939	-				-0.2
2,354,014	+		Echvi_2002	0.13	-2.2
2,354,024	+		Echvi_2002	0.14	-0.5
2,354,024	+		Echvi_2002	0.14	-1.6
2,354,082	+		Echvi_2002	0.18	-0.6
2,354,082	+		Echvi_2002	0.18	-0.4
2,354,082	+		Echvi_2002	0.18	-1.5
2,354,082	+		Echvi_2002	0.18	-0.5
2,354,128	+		Echvi_2002	0.22	-2.8
2,354,130	+		Echvi_2002	0.22	-0.8
2,354,130	+		Echvi_2002	0.22	-0.2
2,354,141	+		Echvi_2002	0.23	-0.9
2,354,155	-		Echvi_2002	0.24	-0.2
2,354,285	-		Echvi_2002	0.34	-0.2
2,354,358	+		Echvi_2002	0.39	+0.0
2,354,472	+		Echvi_2002	0.48	-1.0
2,354,472	+		Echvi_2002	0.48	-0.4
2,354,473	-		Echvi_2002	0.48	-1.4
2,354,473	-		Echvi_2002	0.48	-2.2
2,354,473	-		Echvi_2002	0.48	-0.7
2,354,473	-		Echvi_2002	0.48	-1.4
2,354,519	+		Echvi_2002	0.52	+0.2
2,354,525	-		Echvi_2002	0.52	-0.8
2,354,530	+		Echvi_2002	0.53	-2.0
2,354,537	-		Echvi_2002	0.53	+0.1
2,354,537	-		Echvi_2002	0.53	-0.2
2,354,537	-		Echvi_2002	0.53	+0.4
2,354,538	+		Echvi_2002	0.53	-0.0
2,354,538	+		Echvi_2002	0.53	-0.5
2,354,739	+		Echvi_2002	0.69	+0.6
2,354,739	+		Echvi_2002	0.69	-2.0
2,354,791	+		Echvi_2002	0.73	-0.1
2,354,791	+		Echvi_2002	0.73	+0.7
2,354,792	-		Echvi_2002	0.73	+3.4
2,354,792	-		Echvi_2002	0.73	-0.1
2,354,823	-		Echvi_2002	0.75	-0.8
2,354,920	+		Echvi_2002	0.83	+1.0
2,354,930	+		Echvi_2002	0.84	-1.3
2,354,931	-		Echvi_2002	0.84	-0.9
2,355,122	-				-0.2
2,355,140	-				+0.1
2,355,142	+				+0.8
2,355,156	-				+1.4
2,355,240	+				-0.3
2,355,359	-				-1.6
2,355,359	-				-0.1
2,355,409	-				-1.1
2,355,514	+		Echvi_2003	0.14	+1.1
2,355,544	+		Echvi_2003	0.16	+0.1
2,355,553	+		Echvi_2003	0.16	-1.2
2,355,641	-		Echvi_2003	0.21	-0.4
2,355,742	+		Echvi_2003	0.26	-0.5
2,355,742	+		Echvi_2003	0.26	+0.3
2,355,743	-		Echvi_2003	0.26	+0.2
2,355,743	-		Echvi_2003	0.26	+0.3
2,355,860	+		Echvi_2003	0.33	-0.3
2,355,864	+		Echvi_2003	0.33	+0.8
2,355,864	+		Echvi_2003	0.33	-0.3
2,355,865	-		Echvi_2003	0.33	+0.2
2,355,865	-		Echvi_2003	0.33	+0.1
2,355,872	+		Echvi_2003	0.33	+3.1
2,355,878	+		Echvi_2003	0.34	+1.3
2,355,878	+		Echvi_2003	0.34	-0.2
2,355,878	+		Echvi_2003	0.34	-1.3
2,355,879	-		Echvi_2003	0.34	+0.4
2,355,960	+		Echvi_2003	0.38	+0.3
2,355,961	-		Echvi_2003	0.38	+0.1
2,355,989	+		Echvi_2003	0.40	-0.8
2,356,013	-		Echvi_2003	0.41	+0.1
2,356,016	+		Echvi_2003	0.41	+0.6
2,356,017	-		Echvi_2003	0.41	-1.0
2,356,017	-		Echvi_2003	0.41	-1.9
2,356,031	-		Echvi_2003	0.42	-0.5
2,356,031	-		Echvi_2003	0.42	-0.7
2,356,108	+		Echvi_2003	0.46	-2.5