Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1980

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
2,331,069	-		Echvi_1978	0.70	-0.0
2,331,084	-		Echvi_1978	0.72	-0.0
2,331,114	+		Echvi_1978	0.74	+0.4
2,331,121	+		Echvi_1978	0.75	-1.5
2,331,141	+		Echvi_1978	0.76	+1.1
2,331,141	+		Echvi_1978	0.76	+0.8
2,331,141	+		Echvi_1978	0.76	+1.1
2,331,142	-		Echvi_1978	0.77	+0.8
2,331,143	+		Echvi_1978	0.77	+1.0
2,331,144	-		Echvi_1978	0.77	-0.8
2,331,155	-		Echvi_1978	0.78	+2.8
2,331,155	-		Echvi_1978	0.78	-0.9
2,331,221	+		Echvi_1978	0.83	+0.0
2,331,221	+		Echvi_1978	0.83	+0.1
2,331,222	-		Echvi_1978	0.83	-0.7
2,331,248	+		Echvi_1978	0.85	+0.1
2,331,249	-		Echvi_1978	0.85	+0.3
2,331,258	+		Echvi_1978	0.86	+3.4
2,331,314	+				-0.8
2,331,315	-				-0.5
2,331,373	+				+0.1
2,331,422	+				-0.3
2,331,423	-				-1.2
2,331,425	+				+0.2
2,331,425	+				-0.3
2,331,425	+				+0.2
2,331,425	+				-1.0
2,331,426	-				-0.4
2,331,426	-				+0.0
2,331,426	-				+1.4
2,331,428	-				+0.6
2,331,437	-				-0.4
2,331,437	-				+0.5
2,331,488	+		Echvi_1979	0.17	+0.3
2,331,488	+		Echvi_1979	0.17	-0.6
2,331,601	+		Echvi_1979	0.46	+0.1
2,331,608	-		Echvi_1979	0.48	-0.2
2,331,608	-		Echvi_1979	0.48	-1.2
2,331,621	+		Echvi_1979	0.51	+0.2
2,331,621	+		Echvi_1979	0.51	+0.2
2,331,794	-				+1.7
2,331,794	-				-1.1
2,331,977	+				-0.3
2,331,980	+				+1.0
2,332,091	-		Echvi_1980	0.44	-0.9
2,332,101	+		Echvi_1980	0.49	-0.9
2,332,102	-		Echvi_1980	0.49	-0.5
2,332,327	-				+0.2
2,332,458	+				-1.4
2,332,459	-				-0.4
2,332,465	-				-0.6
2,332,520	-				+0.2
2,332,554	+				-1.2
2,332,555	-				-0.9
2,332,555	-				-0.6
2,332,555	-				-1.7
2,332,555	-				+0.4
2,332,555	-				+1.8
2,332,614	+				+0.1
2,332,615	-				-0.8
2,332,615	-				-0.4
2,332,636	-				+0.2
2,332,638	+				-0.4
2,332,639	-				+0.5
2,332,668	+				-0.2
2,332,669	-				-0.9
2,332,679	+				-0.6
2,332,680	-				+1.8
2,332,680	-				-0.2
2,332,680	-				+0.0
2,332,750	+		Echvi_1981	0.13	+0.2
2,332,750	+		Echvi_1981	0.13	+0.8
2,332,750	+		Echvi_1981	0.13	-0.3
2,332,750	+		Echvi_1981	0.13	-0.3
2,332,750	+		Echvi_1981	0.13	-0.0
2,332,750	+		Echvi_1981	0.13	+1.0
2,332,750	+		Echvi_1981	0.13	+0.4
2,332,750	+		Echvi_1981	0.13	-1.4
2,332,751	-		Echvi_1981	0.13	+1.4
2,332,751	-		Echvi_1981	0.13	-2.6
2,332,753	-		Echvi_1981	0.14	-0.5
2,332,770	-		Echvi_1981	0.15	-0.6
2,332,773	+		Echvi_1981	0.16	-0.6
2,332,773	+		Echvi_1981	0.16	-1.6
2,332,773	+		Echvi_1981	0.16	-0.3
2,332,774	-		Echvi_1981	0.16	+0.4
2,332,781	-		Echvi_1981	0.17	-0.1
2,332,786	+		Echvi_1981	0.17	-0.3
2,332,786	+		Echvi_1981	0.17	+0.1
2,332,787	-		Echvi_1981	0.17	+0.5
2,332,787	-		Echvi_1981	0.17	+0.5
2,332,789	+		Echvi_1981	0.17	-0.4
2,332,789	+		Echvi_1981	0.17	-0.2
2,332,790	-		Echvi_1981	0.17	-0.3
2,332,790	-		Echvi_1981	0.17	+0.8
2,332,790	-		Echvi_1981	0.17	+0.5
2,332,832	-		Echvi_1981	0.22	+0.0
2,332,832	-		Echvi_1981	0.22	-0.4
2,332,836	-		Echvi_1981	0.22	+0.5
2,332,900	-		Echvi_1981	0.29	-0.7
2,332,927	-		Echvi_1981	0.32	+1.4
2,332,929	+		Echvi_1981	0.32	-0.9
2,332,954	+		Echvi_1981	0.34	+0.7
2,332,980	+		Echvi_1981	0.37	+0.3
2,332,981	-		Echvi_1981	0.37	-1.9
2,332,981	-		Echvi_1981	0.37	+0.0
2,333,009	+		Echvi_1981	0.40	+0.0
2,333,010	-		Echvi_1981	0.40	-1.1
2,333,010	-		Echvi_1981	0.40	-0.5
2,333,043	-		Echvi_1981	0.44	-0.5
2,333,048	+		Echvi_1981	0.44	-0.1
2,333,057	+		Echvi_1981	0.45	-0.4
2,333,058	-		Echvi_1981	0.45	-1.5
2,333,081	+		Echvi_1981	0.47	+0.2
2,333,081	+		Echvi_1981	0.47	-0.2
2,333,081	+		Echvi_1981	0.47	+0.5
2,333,082	-		Echvi_1981	0.48	+0.5
2,333,084	+		Echvi_1981	0.48	+0.7
2,333,085	-		Echvi_1981	0.48	-0.1
2,333,085	-		Echvi_1981	0.48	-0.5
2,333,085	-		Echvi_1981	0.48	+0.4
2,333,085	-		Echvi_1981	0.48	-1.2
2,333,100	+		Echvi_1981	0.49	-1.2
2,333,101	-		Echvi_1981	0.49	-0.8
2,333,101	-		Echvi_1981	0.49	+0.2
2,333,130	+		Echvi_1981	0.52	+0.9
2,333,169	-		Echvi_1981	0.56	+0.8
2,333,189	+		Echvi_1981	0.59	+0.5
2,333,190	-		Echvi_1981	0.59	+1.1
2,333,194	-		Echvi_1981	0.59	-0.2