Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0004

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
2,678	+		Echvi_0003	0.16	+2.8
2,767	+		Echvi_0003	0.24	-1.2
2,768	-		Echvi_0003	0.25	+0.4
3,134	+		Echvi_0003	0.61	-0.6
3,161	+		Echvi_0003	0.64	+0.1
3,161	+		Echvi_0003	0.64	+1.1
3,162	-		Echvi_0003	0.64	-0.5
3,232	-		Echvi_0003	0.71	+0.5
3,382	+		Echvi_0003	0.86	-0.2
3,383	-		Echvi_0003	0.86	-2.5
3,383	-		Echvi_0003	0.86	-0.3
3,563	-				+0.1
3,567	+				-0.8
3,616	+		Echvi_0004	0.16	-0.5
3,695	-		Echvi_0004	0.36	+0.9
3,695	-		Echvi_0004	0.36	+1.1
3,704	+		Echvi_0004	0.38	-1.3
3,705	-		Echvi_0004	0.38	+0.6
3,719	+		Echvi_0004	0.42	+1.8
3,785	-		Echvi_0004	0.58	+1.2
3,795	-		Echvi_0004	0.60	+1.3
3,876	-		Echvi_0004	0.80	+0.3
3,876	-		Echvi_0004	0.80	-0.2
3,925	-				-0.1
3,931	+				+0.2
3,931	+				+0.3
3,931	+				-0.9
3,932	-				+0.1
3,935	-				+0.0
3,936	+				+1.4
4,013	+				+0.5
4,014	-				-0.1
4,017	-				+0.1
4,049	+				+0.7
4,677	+				-0.2
4,709	+				-3.6
4,709	+				-0.5
4,709	+				-1.1
4,709	+				-0.1
4,710	-				-1.1
4,713	+				-1.3
4,891	-		Echvi_0006	0.30	-0.5
4,922	+		Echvi_0006	0.35	-1.5
4,922	+		Echvi_0006	0.35	-1.0
4,922	+		Echvi_0006	0.35	-1.6
4,923	-		Echvi_0006	0.35	-2.1
4,924	+		Echvi_0006	0.35	-1.0
4,925	-		Echvi_0006	0.36	+1.8
4,945	-		Echvi_0006	0.39	-2.0