Strain Fitness in Escherichia coli BW25113 around b4550

Experiment: Cephalothin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.01 mg/ml
3,435,474	-	trkA	b3290	0.68	+1.3
3,435,476	-	trkA	b3290	0.68	+4.9
3,435,613	+	trkA	b3290	0.78	+3.5
3,435,699	+	trkA	b3290	0.84	+4.2
3,435,809	+				+3.8
3,435,840	+				+2.8
3,435,840	+				+3.1
3,435,842	+				+2.5
3,435,877	+				+1.3
3,435,889	+				+1.1
3,435,889	+				+2.1
3,435,889	+				+0.9
3,435,889	+				+3.2
3,435,903	+				+2.1
3,436,020	-				+0.0
3,436,020	-				+0.5
3,436,020	-				-0.5
3,436,026	+				+0.1
3,436,027	+				-0.5
3,436,027	+				+0.7
3,436,037	-				-2.2
3,436,037	-				-1.1
3,436,045	-				-0.6
3,436,047	-				+1.2
3,436,061	-				+1.7
3,436,071	+				-0.8
3,436,071	+				-1.5
3,436,081	+				-0.5
3,436,081	+				-0.8
3,436,081	+				-0.5
3,436,081	+				+1.9
3,436,106	-	mscL	b3291	0.15	+1.2
3,436,114	+	mscL	b3291	0.17	+2.1
3,436,146	+	mscL	b3291	0.24	-0.2
3,436,165	+	mscL	b3291	0.29	-1.2
3,436,165	+	mscL	b3291	0.29	+1.1
3,436,175	+	mscL	b3291	0.31	+0.3
3,436,211	-	mscL	b3291	0.40	-0.2
3,436,211	-	mscL	b3291	0.40	+0.1
3,436,218	+	mscL	b3291	0.42	-2.1
3,436,220	+	mscL	b3291	0.42	-0.8
3,436,243	-	mscL	b3291	0.48	-1.1
3,436,245	-	mscL	b3291	0.48	+1.3
3,436,245	-	mscL	b3291	0.48	-1.8
3,436,251	-	mscL	b3291	0.50	+1.3
3,436,256	+	mscL	b3291	0.51	+0.1
3,436,256	-	mscL	b3291	0.51	+0.1
3,436,259	-	mscL	b3291	0.52	-0.8
3,436,261	-	mscL	b3291	0.52	+1.5
3,436,261	-	mscL	b3291	0.52	-2.5
3,436,264	+	mscL	b3291	0.53	+0.5
3,436,264	-	mscL	b3291	0.53	-0.5
3,436,264	-	mscL	b3291	0.53	+1.1
3,436,264	-	mscL	b3291	0.53	-0.1
3,436,329	+	mscL	b3291	0.69	-0.6
3,436,377	+	mscL	b3291	0.81	-0.5
3,436,377	+	mscL	b3291	0.81	+0.5
3,436,380	+	mscL	b3291	0.81	-1.3
3,436,380	+	mscL	b3291	0.81	+1.7
3,436,380	+	mscL	b3291	0.81	-0.1
3,436,380	+	mscL	b3291	0.81	+1.5
3,436,380	+	mscL	b3291	0.81	-0.8
3,436,398	-	mscL	b3291	0.86	-2.3
3,436,429	+				-0.6
3,436,457	-				-0.5
3,436,458	-				-2.3
3,436,460	-				+1.5
3,436,476	+	yhdL	b4550	0.11	-1.3
3,436,482	+	yhdL	b4550	0.13	-0.3
3,436,482	+	yhdL	b4550	0.13	-0.1
3,436,524	-	yhdL	b4550	0.32	+0.7
3,436,524	-	yhdL	b4550	0.32	-0.5
3,436,528	-	yhdL	b4550	0.34	+0.5
3,436,528	-	yhdL	b4550	0.34	-0.3
3,436,551	+	yhdL	b4550	0.45	-0.2
3,436,551	+	yhdL	b4550	0.45	+0.2
3,436,559	-	yhdL	b4550	0.48	+0.1
3,436,617	-	yhdL	b4550	0.75	+0.9
3,436,636	-	yhdL	b4550	0.84	+0.6
3,436,642	-	yhdL	b4550	0.86	-0.5
3,436,644	+	yhdL	b4550	0.87	-0.8
3,436,659	+				+0.1
3,436,748	+				+1.5
3,436,757	+				+1.5
3,436,767	+				-0.4
3,436,796	-	zntR	b3292	0.16	-1.5
3,436,803	+	zntR	b3292	0.18	-0.1
3,436,811	-	zntR	b3292	0.20	+0.5
3,436,811	-	zntR	b3292	0.20	+2.1
3,436,840	+	zntR	b3292	0.27	-1.3
3,436,840	+	zntR	b3292	0.27	-0.8
3,436,848	+	zntR	b3292	0.28	+0.8
3,436,889	+	zntR	b3292	0.38	+1.5
3,436,889	+	zntR	b3292	0.38	+0.5
3,436,927	+	zntR	b3292	0.47	-1.8
3,436,935	-	zntR	b3292	0.49	-0.2
3,436,935	-	zntR	b3292	0.49	-2.5
3,436,987	-	zntR	b3292	0.61	+1.5
3,436,994	-	zntR	b3292	0.63	-0.1
3,436,994	-	zntR	b3292	0.63	-0.7
3,437,070	-	zntR	b3292	0.81	+1.2
3,437,111	-				-0.9
3,437,111	-				+0.3
3,437,158	-				+0.5
3,437,158	-				-1.0
3,437,166	-				-1.1
3,437,223	+	yhdN	b3293	0.16	-0.5
3,437,226	+	yhdN	b3293	0.17	-2.8
3,437,234	-	yhdN	b3293	0.19	-1.1
3,437,276	+	yhdN	b3293	0.31	-2.8
3,437,338	+	yhdN	b3293	0.47	+0.7
3,437,425	-	yhdN	b3293	0.71	-1.1
3,437,425	-	yhdN	b3293	0.71	-2.0
3,437,492	+	yhdN	b3293	0.89	+0.1
3,437,500	-				+0.2
3,437,500	-				-1.1
3,437,502	-				+0.8
3,437,504	+				-0.1
3,437,529	+				-0.8
3,437,534	-				-0.6
3,437,669	-				-1.3