Strain Fitness in Escherichia coli BW25113 around b4082

Experiment: Cephalothin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.01 mg/ml
4,300,168	+	yjcQ	b4081	0.54	+1.0
4,300,354	+	yjcQ	b4081	0.64	+0.8
4,300,360	-	yjcQ	b4081	0.64	+1.3
4,300,483	+	yjcQ	b4081	0.70	-1.1
4,300,483	+	yjcQ	b4081	0.70	+0.6
4,300,570	-	yjcQ	b4081	0.74	-0.1
4,300,570	-	yjcQ	b4081	0.74	-1.0
4,300,608	-	yjcQ	b4081	0.76	+1.4
4,300,610	-	yjcQ	b4081	0.76	+0.3
4,300,628	+	yjcQ	b4081	0.77	+0.6
4,300,628	+	yjcQ	b4081	0.77	-1.4
4,300,680	-	yjcQ	b4081	0.79	+0.6
4,300,723	+	yjcQ	b4081	0.82	-0.8
4,300,805	+	yjcQ	b4081	0.86	+1.0
4,300,908	-				+1.2
4,300,908	-				-0.4
4,300,931	-				+0.6
4,300,948	+				-1.7
4,301,002	-				-1.7
4,301,002	-				+0.6
4,301,003	+				+0.6
4,301,003	+				-1.0
4,301,006	-				-0.6
4,301,093	-				-0.8
4,301,167	-				-1.4
4,301,167	-				-0.4
4,301,198	+				+1.8
4,301,247	-	yjcR	b4082	0.14	-1.4
4,301,247	-	yjcR	b4082	0.14	+0.6
4,301,349	-	yjcR	b4082	0.24	+0.8
4,301,349	-	yjcR	b4082	0.24	-1.4
4,301,357	+	yjcR	b4082	0.25	-0.3
4,301,404	-	yjcR	b4082	0.29	-2.0
4,301,533	+	yjcR	b4082	0.42	-0.3
4,301,581	+	yjcR	b4082	0.47	+1.6
4,301,611	-	yjcR	b4082	0.49	-2.0
4,301,611	-	yjcR	b4082	0.49	+0.0
4,301,722	-	yjcR	b4082	0.60	-1.4
4,301,722	-	yjcR	b4082	0.60	-0.6
4,301,771	+	yjcR	b4082	0.65	+2.6
4,301,771	+	yjcR	b4082	0.65	-2.0
4,301,844	-	yjcR	b4082	0.72	+0.6
4,301,943	+	yjcR	b4082	0.82	+1.3
4,301,943	+	yjcR	b4082	0.82	-0.7
4,301,949	+	yjcR	b4082	0.82	-1.2
4,301,981	+	yjcR	b4082	0.85	-0.4
4,301,985	+	yjcR	b4082	0.86	+0.6
4,301,985	+	yjcR	b4082	0.86	-0.2
4,302,029	+				+0.1
4,302,039	-				-0.1
4,302,051	+				+1.0
4,302,075	-				+2.9
4,302,075	-				+1.2
4,302,077	+				-0.7
4,302,077	+				+1.4
4,302,077	+				-1.4
4,302,085	-				-0.3
4,302,085	-				-0.6
4,302,089	+				+0.0
4,302,110	+				+1.2
4,302,110	+				-1.0
4,302,119	+				+1.0
4,302,119	+				-1.2
4,302,125	+				+0.6
4,302,138	+				-1.4
4,302,139	+				+0.3
4,302,149	+				+1.6
4,302,149	+				+0.9
4,302,149	+				+0.6
4,302,164	+				-0.6
4,302,164	+				-0.2
4,302,164	+				+2.2
4,302,164	+				-1.0
4,302,164	+				-0.4
4,302,164	+				+0.6
4,302,164	+				-0.2
4,302,169	+				+0.6
4,302,169	+				+2.6
4,302,169	+				+1.6
4,302,169	+				+0.0
4,302,169	+				-0.1
4,302,169	+				-2.1
4,302,169	+				+0.7
4,302,169	+				+0.4
4,302,169	+				+1.3
4,302,172	+				+0.4
4,302,172	-				-1.0
4,302,174	+				+0.0
4,302,174	+				-1.4
4,302,176	+				+0.3
4,302,178	+				-0.3
4,302,178	+				-1.2
4,302,178	+				-0.2
4,302,178	+				-1.0
4,302,185	+	ytcA	b4622	0.12	-0.6
4,302,186	+	ytcA	b4622	0.13	-0.1
4,302,200	+	ytcA	b4622	0.18	-0.4
4,302,200	+	ytcA	b4622	0.18	-1.4
4,302,243	+	ytcA	b4622	0.33	-0.2
4,302,301	+	ytcA	b4622	0.54	-0.1
4,302,301	+	ytcA	b4622	0.54	-1.0
4,302,338	+	ytcA	b4622	0.68	-0.5
4,302,338	+	ytcA	b4622	0.68	-2.6
4,302,398	+	ytcA	b4622	0.89	-0.6
4,302,400	+				-2.6
4,302,409	+				+0.6
4,302,417	+				-2.3
4,302,422	+				-0.4
4,302,426	+				+0.0
4,302,431	+				+0.6
4,302,431	+				-2.0
4,302,440	+				+0.6
4,302,440	+				+0.2
4,302,453	+				-0.4
4,302,453	+				+0.0
4,302,456	+				-1.4
4,302,456	+				+1.6
4,302,456	+				+1.1
4,302,485	+				-1.3
4,302,493	+				-0.4
4,302,621	-				-0.9
4,302,625	-				+0.8
4,302,625	-				-0.4
4,302,654	-				+2.2
4,302,659	-				-0.2
4,302,703	-				+1.6
4,302,703	-				-0.6
4,302,718	-				-1.7
4,302,718	-				-2.7
4,302,761	-				-0.3
4,302,765	+				+1.9
4,302,765	+				-1.0
4,302,770	-				-0.7
4,302,770	-				-0.2
4,302,775	-				-0.6
4,302,775	-				-1.4
4,302,775	-				-0.6
4,302,777	+				+0.5
4,302,777	+				+1.2
4,302,780	-				+1.6
4,302,784	-				-0.2
4,302,784	-				-1.4
4,302,787	-				-0.3
4,302,795	-				+0.1
4,302,798	+				-0.2
4,302,805	-				+0.6
4,302,806	-				+0.7
4,302,807	-				-1.0
4,302,807	-				+0.6
4,302,810	-				-1.0
4,302,856	+	yjcS	b4083	0.11	-1.0
4,302,857	+	yjcS	b4083	0.11	+0.1
4,302,882	-	yjcS	b4083	0.12	+0.7
4,302,890	+	yjcS	b4083	0.13	+0.1
4,303,022	+	yjcS	b4083	0.19	+0.2
4,303,022	+	yjcS	b4083	0.19	-1.0
4,303,073	-	yjcS	b4083	0.22	-0.4