Strain Fitness in Escherichia coli BW25113 around b3952

Experiment: Cephalothin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.01 mg/ml
4,143,434	+	pflD	b3951	0.62	+1.6
4,143,436	-	pflD	b3951	0.62	+0.7
4,143,445	-	pflD	b3951	0.62	-0.2
4,143,445	-	pflD	b3951	0.62	+0.8
4,143,446	+	pflD	b3951	0.62	+0.0
4,143,718	+	pflD	b3951	0.74	-0.1
4,143,718	+	pflD	b3951	0.74	-0.7
4,143,776	+	pflD	b3951	0.77	+2.1
4,143,784	-	pflD	b3951	0.77	+0.7
4,143,802	-	pflD	b3951	0.78	-1.0
4,143,802	-	pflD	b3951	0.78	+2.6
4,143,853	-	pflD	b3951	0.80	+0.3
4,143,862	+	pflD	b3951	0.80	+0.6
4,143,862	+	pflD	b3951	0.80	+0.6
4,143,870	+	pflD	b3951	0.81	-0.7
4,143,870	+	pflD	b3951	0.81	-1.0
4,143,872	+	pflD	b3951	0.81	-0.1
4,143,872	-	pflD	b3951	0.81	-1.0
4,143,872	-	pflD	b3951	0.81	+0.6
4,143,883	+	pflD	b3951	0.81	-1.9
4,143,895	-	pflD	b3951	0.82	-0.7
4,144,012	+	pflD	b3951	0.87	+0.6
4,144,012	+	pflD	b3951	0.87	-0.7
4,144,019	+	pflD	b3951	0.87	+0.3
4,144,020	-	pflD	b3951	0.87	+0.2
4,144,021	+	pflD	b3951	0.87	-1.1
4,144,036	+	pflD	b3951	0.88	+0.2
4,144,039	-	pflD	b3951	0.88	-1.4
4,144,066	-	pflD	b3951	0.89	+2.2
4,144,079	+	pflD	b3951	0.90	+1.2
4,144,084	-	pflD	b3951	0.90	-0.2
4,144,086	+				+0.9
4,144,133	-				-0.8
4,144,135	+				-0.0
4,144,135	+				-0.8
4,144,162	-				-0.4
4,144,235	+				+0.2
4,144,235	+				-0.8
4,144,243	-				+0.9
4,144,243	-				+0.6
4,144,287	-				+0.6
4,144,304	-				-2.0
4,144,317	-				+1.8
4,144,317	-				+1.4
4,144,409	+	pflC	b3952	0.15	-1.0
4,144,445	-	pflC	b3952	0.19	-0.1
4,144,454	+	pflC	b3952	0.20	-1.4
4,144,454	+	pflC	b3952	0.20	-2.6
4,144,479	+	pflC	b3952	0.23	-1.0
4,144,479	+	pflC	b3952	0.23	-0.6
4,144,505	-	pflC	b3952	0.25	+0.0
4,144,592	-	pflC	b3952	0.35	-0.4
4,144,592	-	pflC	b3952	0.35	+0.1
4,144,599	+	pflC	b3952	0.36	+0.6
4,144,599	+	pflC	b3952	0.36	+1.2
4,144,709	+	pflC	b3952	0.49	-0.1
4,144,770	-	pflC	b3952	0.56	-0.2
4,144,841	+	pflC	b3952	0.64	+1.1
4,144,952	+	pflC	b3952	0.76	-0.4
4,144,983	-	pflC	b3952	0.80	-2.0
4,144,983	-	pflC	b3952	0.80	+0.6
4,145,095	-				-1.0
4,145,097	+				-0.4
4,145,097	+				+1.0
4,145,109	-				-2.4
4,145,142	-				-0.1
4,145,142	-				+1.3
4,145,142	-				+0.6
4,145,190	+				+0.2
4,145,190	+				+0.6
4,145,261	-	frwD	b3953	0.29	+0.3
4,145,263	-	frwD	b3953	0.30	-0.8
4,145,264	-	frwD	b3953	0.30	+0.7
4,145,341	-	frwD	b3953	0.53	+1.2
4,145,354	+	frwD	b3953	0.56	+1.2
4,145,354	+	frwD	b3953	0.56	+0.3
4,145,364	+	frwD	b3953	0.59	+0.6
4,145,364	+	frwD	b3953	0.59	-0.6
4,145,372	-	frwD	b3953	0.62	+0.5
4,145,398	+	frwD	b3953	0.69	+0.6
4,145,398	+	frwD	b3953	0.69	-0.7
4,145,411	-	frwD	b3953	0.73	+0.5
4,145,419	+	frwD	b3953	0.75	+0.9
4,145,452	+	frwD	b3953	0.85	-0.8
4,145,499	-				+0.9
4,145,500	-				-1.0
4,145,525	+				+0.9
4,145,612	+	yijO	b3954	0.14	-1.4
4,145,626	-	yijO	b3954	0.16	+0.1
4,145,638	+	yijO	b3954	0.17	-0.8
4,145,658	+	yijO	b3954	0.20	+1.2
4,145,658	+	yijO	b3954	0.20	-0.4
4,145,669	+	yijO	b3954	0.21	+1.6
4,145,669	+	yijO	b3954	0.21	+0.6
4,145,677	-	yijO	b3954	0.22	+0.1
4,145,697	-	yijO	b3954	0.24	+0.6
4,145,697	-	yijO	b3954	0.24	+1.3
4,145,800	-	yijO	b3954	0.37	+1.0
4,145,843	+	yijO	b3954	0.42	+0.6
4,145,853	+	yijO	b3954	0.43	+0.4
4,145,856	-	yijO	b3954	0.43	-0.2
4,145,900	+	yijO	b3954	0.48	-1.6
4,145,900	+	yijO	b3954	0.48	-0.4
4,146,038	+	yijO	b3954	0.64	+0.1
4,146,069	+	yijO	b3954	0.68	+0.2
4,146,091	-	yijO	b3954	0.71	+2.4
4,146,093	+	yijO	b3954	0.71	+0.1
4,146,137	+	yijO	b3954	0.76	-0.1
4,146,140	+	yijO	b3954	0.76	-2.4
4,146,148	+	yijO	b3954	0.77	+2.9