Strain Fitness in Escherichia coli BW25113 around b3846

Experiment: Cephalothin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.01 mg/ml
4,025,846	+	fadA	b3845	0.18	+0.4
4,025,907	-	fadA	b3845	0.24	+1.2
4,025,930	+	fadA	b3845	0.26	+0.4
4,025,930	+	fadA	b3845	0.26	-0.7
4,025,955	-	fadA	b3845	0.28	-0.2
4,025,955	-	fadA	b3845	0.28	-0.7
4,025,980	-	fadA	b3845	0.30	-0.4
4,025,980	-	fadA	b3845	0.30	-0.4
4,025,982	+	fadA	b3845	0.30	-0.1
4,025,987	+	fadA	b3845	0.30	-0.9
4,026,002	-	fadA	b3845	0.32	+1.0
4,026,047	+	fadA	b3845	0.36	+0.4
4,026,047	+	fadA	b3845	0.36	-0.4
4,026,075	+	fadA	b3845	0.38	+0.2
4,026,075	+	fadA	b3845	0.38	-0.4
4,026,075	+	fadA	b3845	0.38	+0.3
4,026,163	+	fadA	b3845	0.46	+0.6
4,026,163	+	fadA	b3845	0.46	-0.7
4,026,189	+	fadA	b3845	0.48	-0.3
4,026,198	-	fadA	b3845	0.49	+0.6
4,026,220	+	fadA	b3845	0.51	-0.9
4,026,256	+	fadA	b3845	0.54	+0.1
4,026,258	+	fadA	b3845	0.54	-1.2
4,026,380	+	fadA	b3845	0.64	-0.9
4,026,390	+	fadA	b3845	0.65	-0.4
4,026,438	-	fadA	b3845	0.69	-0.0
4,026,439	-	fadA	b3845	0.69	+2.6
4,026,486	+	fadA	b3845	0.73	+3.2
4,026,486	+	fadA	b3845	0.73	+0.9
4,026,496	+	fadA	b3845	0.74	+0.2
4,026,552	-	fadA	b3845	0.79	+0.1
4,026,554	+	fadA	b3845	0.79	-0.3
4,026,556	+	fadA	b3845	0.79	+1.2
4,026,556	+	fadA	b3845	0.79	+1.0
4,026,556	+	fadA	b3845	0.79	+0.6
4,026,614	-	fadA	b3845	0.84	-0.9
4,026,618	+	fadA	b3845	0.85	+0.6
4,026,626	-	fadA	b3845	0.85	-0.6
4,026,657	+	fadA	b3845	0.88	-1.7
4,026,666	-	fadA	b3845	0.89	+0.2
4,026,759	-				+1.6
4,026,759	-				+3.2
4,026,851	+				+0.6
4,026,851	+				+1.2
4,026,900	-				-0.9
4,026,900	-				-0.7
4,026,909	-				-0.2
4,026,974	-				+2.6
4,026,979	-				+0.6
4,026,989	+				+0.6
4,026,999	+				+1.6
4,026,999	+				+2.6
4,027,013	+				-1.7
4,027,013	+				-0.4
4,027,013	+				-0.9
4,027,062	+	fadB	b3846	0.12	+1.1
4,027,062	+	fadB	b3846	0.12	+0.1
4,027,070	-	fadB	b3846	0.12	-0.8
4,027,070	-	fadB	b3846	0.12	-0.7
4,027,079	+	fadB	b3846	0.13	+0.6
4,027,210	-	fadB	b3846	0.18	-1.1
4,027,246	-	fadB	b3846	0.20	-0.4
4,027,326	-	fadB	b3846	0.24	+1.5
4,027,369	+	fadB	b3846	0.26	+0.6
4,027,375	-	fadB	b3846	0.26	+0.2
4,027,504	-	fadB	b3846	0.32	-0.5
4,027,504	-	fadB	b3846	0.32	+0.8
4,027,547	+	fadB	b3846	0.34	+1.6
4,027,547	+	fadB	b3846	0.34	+1.4
4,027,551	-	fadB	b3846	0.34	+0.2
4,027,551	-	fadB	b3846	0.34	+0.7
4,027,552	-	fadB	b3846	0.34	-1.0
4,027,635	+	fadB	b3846	0.38	+0.7
4,027,642	-	fadB	b3846	0.38	+0.2
4,027,642	-	fadB	b3846	0.38	+0.6
4,027,643	-	fadB	b3846	0.38	+0.1
4,027,671	+	fadB	b3846	0.40	-0.9
4,027,728	-	fadB	b3846	0.42	+0.8
4,027,998	-	fadB	b3846	0.54	-0.1
4,028,012	-	fadB	b3846	0.55	-2.7
4,028,023	-	fadB	b3846	0.56	-0.2
4,028,035	+	fadB	b3846	0.56	+0.8
4,028,147	+	fadB	b3846	0.61	+0.5
4,028,152	+	fadB	b3846	0.62	+0.3
4,028,184	-	fadB	b3846	0.63	+0.3
4,028,217	+	fadB	b3846	0.64	+0.5
4,028,237	-	fadB	b3846	0.65	+0.8
4,028,310	-	fadB	b3846	0.69	-0.4
4,028,310	-	fadB	b3846	0.69	-1.4
4,028,333	-	fadB	b3846	0.70	-1.2
4,028,374	+	fadB	b3846	0.72	+1.6
4,028,374	+	fadB	b3846	0.72	-0.7
4,028,439	-	fadB	b3846	0.75	+1.6
4,028,521	+	fadB	b3846	0.78	-0.9
4,028,521	+	fadB	b3846	0.78	-0.8
4,028,531	-	fadB	b3846	0.79	+0.4
4,028,538	+	fadB	b3846	0.79	+0.8
4,028,541	-	fadB	b3846	0.79	-0.4
4,028,670	+	fadB	b3846	0.85	-0.8
4,028,670	-	fadB	b3846	0.85	+3.0
4,028,670	-	fadB	b3846	0.85	+1.2
4,028,713	-	fadB	b3846	0.87	-1.4
4,028,757	-	fadB	b3846	0.89	+1.2
4,028,787	+				+1.6
4,028,787	+				+1.6
4,028,793	-				-0.4
4,028,844	-				-0.4
4,028,889	+				-0.4
4,028,899	+				+0.2
4,028,952	+				+0.6
4,028,960	-				-0.0
4,028,976	-				-1.5
4,028,976	-				+0.5
4,028,984	+				+0.6
4,029,003	+				+1.1
4,029,097	+				+1.4
4,029,097	+				-1.4
4,029,273	+				-1.7
4,029,275	+				+0.9
4,029,330	+	pepQ	b3847	0.11	+0.1
4,029,330	+	pepQ	b3847	0.11	-1.4
4,029,411	-	pepQ	b3847	0.17	+0.5
4,029,412	-	pepQ	b3847	0.17	-0.6
4,029,416	-	pepQ	b3847	0.17	+0.1
4,029,416	-	pepQ	b3847	0.17	+0.6
4,029,436	-	pepQ	b3847	0.19	+2.2
4,029,458	-	pepQ	b3847	0.21	-0.1
4,029,477	+	pepQ	b3847	0.22	+0.6
4,029,527	+	pepQ	b3847	0.26	-1.5
4,029,571	-	pepQ	b3847	0.29	+0.9
4,029,587	-	pepQ	b3847	0.30	-0.5
4,029,610	-	pepQ	b3847	0.32	-0.9
4,029,610	-	pepQ	b3847	0.32	-0.9
4,029,610	-	pepQ	b3847	0.32	+0.4
4,029,610	-	pepQ	b3847	0.32	-0.1
4,029,610	-	pepQ	b3847	0.32	+0.1
4,029,631	-	pepQ	b3847	0.34	+0.1
4,029,641	-	pepQ	b3847	0.34	+1.6
4,029,649	+	pepQ	b3847	0.35	+0.2
4,029,654	-	pepQ	b3847	0.35	+0.3
4,029,654	-	pepQ	b3847	0.35	-1.4
4,029,679	+	pepQ	b3847	0.37	+0.6
4,029,685	+	pepQ	b3847	0.38	-0.1
4,029,749	+	pepQ	b3847	0.42	+0.3
4,029,749	+	pepQ	b3847	0.42	-0.9
4,029,757	-	pepQ	b3847	0.43	+1.0
4,029,757	-	pepQ	b3847	0.43	-1.4
4,029,767	-	pepQ	b3847	0.44	-0.4
4,029,806	+	pepQ	b3847	0.47	+0.4
4,029,812	-	pepQ	b3847	0.47	+1.1
4,029,812	-	pepQ	b3847	0.47	-0.2
4,029,820	+				+0.6
4,029,820	+	pepQ	b3847	0.48	+0.6
4,029,820	+	pepQ	b3847	0.48	+0.6
4,029,820	+	pepQ	b3847	0.48	+1.2
4,029,825	+	pepQ	b3847	0.48	+0.1
4,029,825	+	pepQ	b3847	0.48	-0.4
4,029,859	+	pepQ	b3847	0.51	+1.0
4,029,859	+	pepQ	b3847	0.51	+0.6
4,029,867	-	pepQ	b3847	0.51	+0.2
4,029,867	-	pepQ	b3847	0.51	+0.1
4,029,867	-	pepQ	b3847	0.51	-0.4
4,029,869	+	pepQ	b3847	0.51	-0.9
4,029,869	+	pepQ	b3847	0.51	-1.4
4,029,921	-	pepQ	b3847	0.55	+0.4
4,029,931	+	pepQ	b3847	0.56	-0.7
4,029,987	+	pepQ	b3847	0.60	+0.1