Strain Fitness in Escherichia coli BW25113 around b3532

Experiment: Cephalothin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.01 mg/ml
3,687,324	+	bcsZ	b3531	0.13	-0.7
3,687,334	-	bcsZ	b3531	0.14	+0.8
3,687,340	+	bcsZ	b3531	0.15	+0.3
3,687,404	-	bcsZ	b3531	0.20	+2.1
3,687,484	-	bcsZ	b3531	0.28	-0.2
3,687,509	-	bcsZ	b3531	0.30	+1.0
3,687,509	-	bcsZ	b3531	0.30	+2.1
3,687,523	-	bcsZ	b3531	0.31	+0.1
3,687,523	-	bcsZ	b3531	0.31	+1.0
3,687,546	+	bcsZ	b3531	0.33	-1.4
3,687,555	+	bcsZ	b3531	0.34	-1.0
3,687,555	+	bcsZ	b3531	0.34	-0.4
3,687,592	+	bcsZ	b3531	0.37	+0.6
3,687,658	-	bcsZ	b3531	0.43	-1.4
3,687,658	-	bcsZ	b3531	0.43	+0.6
3,687,689	+	bcsZ	b3531	0.46	-0.3
3,687,769	-	bcsZ	b3531	0.53	-0.7
3,687,792	+	bcsZ	b3531	0.55	-2.2
3,687,856	+	bcsZ	b3531	0.61	-0.4
3,687,916	-	bcsZ	b3531	0.67	+0.2
3,687,920	+	bcsZ	b3531	0.67	+1.6
3,687,997	-	bcsZ	b3531	0.74	-0.0
3,688,039	+	bcsZ	b3531	0.78	+0.6
3,688,102	-	bcsZ	b3531	0.83	-0.4
3,688,102	-	bcsZ	b3531	0.83	+0.6
3,688,168	+	bcsZ	b3531	0.89	-0.4
3,688,177	+				-0.8
3,688,183	-				-0.8
3,688,198	+				-0.4
3,688,213	+				-0.3
3,688,216	-				-0.2
3,688,216	-				+1.3
3,688,217	-				-0.2
3,688,221	-				-0.3
3,688,304	-				-1.0
3,688,306	-				-1.0
3,688,352	-				-0.0
3,688,352	-				-1.0
3,688,362	+				-1.0
3,688,362	+				+0.6
3,688,363	-				+1.1
3,688,375	-				+0.9
3,688,441	-				+0.8
3,688,571	+	bcsB	b3532	0.12	-1.2
3,688,571	-	bcsB	b3532	0.12	+0.1
3,688,582	+	bcsB	b3532	0.12	-1.4
3,688,583	+	bcsB	b3532	0.12	-0.1
3,688,604	-	bcsB	b3532	0.13	-0.4
3,688,604	-	bcsB	b3532	0.13	+1.8
3,688,634	+	bcsB	b3532	0.15	+0.1
3,688,634	+	bcsB	b3532	0.15	-0.2
3,688,671	-	bcsB	b3532	0.16	+0.9
3,688,702	+	bcsB	b3532	0.18	-0.4
3,688,707	+	bcsB	b3532	0.18	-1.0
3,688,727	+	bcsB	b3532	0.19	-0.4
3,688,727	+	bcsB	b3532	0.19	-1.0
3,688,749	-	bcsB	b3532	0.20	-0.8
3,688,770	-	bcsB	b3532	0.20	-0.9
3,688,778	-	bcsB	b3532	0.21	+0.6
3,688,778	-	bcsB	b3532	0.21	-2.9
3,688,783	-	bcsB	b3532	0.21	-1.2
3,688,814	+	bcsB	b3532	0.22	-0.4
3,688,814	+	bcsB	b3532	0.22	+1.6
3,688,833	+	bcsB	b3532	0.23	-0.4
3,688,843	+	bcsB	b3532	0.24	+0.6
3,688,843	+	bcsB	b3532	0.24	-0.2
3,688,861	-	bcsB	b3532	0.24	-0.7
3,688,868	+	bcsB	b3532	0.25	+0.8
3,688,897	+	bcsB	b3532	0.26	+1.3
3,688,930	-	bcsB	b3532	0.27	-0.4
3,688,944	+	bcsB	b3532	0.28	-2.0
3,688,944	+	bcsB	b3532	0.28	-0.6
3,688,944	+	bcsB	b3532	0.28	-1.2
3,688,944	+	bcsB	b3532	0.28	+1.5
3,688,981	+	bcsB	b3532	0.29	+3.1
3,688,981	+	bcsB	b3532	0.29	+0.6
3,689,014	-	bcsB	b3532	0.31	+1.0
3,689,030	-	bcsB	b3532	0.32	-2.2
3,689,030	-	bcsB	b3532	0.32	+0.6
3,689,076	+	bcsB	b3532	0.34	+0.2
3,689,076	+	bcsB	b3532	0.34	+0.1
3,689,086	+	bcsB	b3532	0.34	-1.2
3,689,125	-	bcsB	b3532	0.36	-1.2
3,689,125	-	bcsB	b3532	0.36	-0.8
3,689,126	+	bcsB	b3532	0.36	+1.8
3,689,126	+	bcsB	b3532	0.36	+0.6
3,689,134	-	bcsB	b3532	0.36	-0.7
3,689,134	-	bcsB	b3532	0.36	-0.4
3,689,161	+	bcsB	b3532	0.37	-0.2
3,689,164	-	bcsB	b3532	0.37	+1.6
3,689,164	-	bcsB	b3532	0.37	-0.2
3,689,224	-	bcsB	b3532	0.40	-0.4
3,689,312	-	bcsB	b3532	0.44	-1.4
3,689,334	+	bcsB	b3532	0.45	+1.6
3,689,336	-	bcsB	b3532	0.45	+0.9
3,689,336	-	bcsB	b3532	0.45	+1.1
3,689,342	-	bcsB	b3532	0.45	+1.6
3,689,377	-	bcsB	b3532	0.46	+0.0
3,689,378	-	bcsB	b3532	0.46	-0.5
3,689,380	-	bcsB	b3532	0.47	-0.0
3,689,383	-	bcsB	b3532	0.47	+0.9
3,689,383	-	bcsB	b3532	0.47	+1.6
3,689,383	-	bcsB	b3532	0.47	+0.6
3,689,398	+	bcsB	b3532	0.47	+0.5
3,689,411	-	bcsB	b3532	0.48	-0.7
3,689,411	-	bcsB	b3532	0.48	-1.0
3,689,421	+	bcsB	b3532	0.48	-0.4
3,689,530	+	bcsB	b3532	0.53	-1.3
3,689,534	+	bcsB	b3532	0.53	-0.0
3,689,543	-	bcsB	b3532	0.54	-0.4
3,689,543	-	bcsB	b3532	0.54	-0.4
3,689,595	+	bcsB	b3532	0.56	+1.1
3,689,595	+	bcsB	b3532	0.56	-1.0
3,689,666	-	bcsB	b3532	0.59	+0.0
3,689,682	-	bcsB	b3532	0.59	+0.9
3,689,731	-	bcsB	b3532	0.62	+1.0
3,689,837	-	bcsB	b3532	0.66	+1.9
3,689,837	-	bcsB	b3532	0.66	-0.4
3,689,862	-	bcsB	b3532	0.67	-1.8
3,689,889	-	bcsB	b3532	0.68	-0.0
3,689,942	+	bcsB	b3532	0.71	-0.8
3,689,964	+	bcsB	b3532	0.71	-1.0
3,689,964	+	bcsB	b3532	0.71	+1.0
3,689,979	-	bcsB	b3532	0.72	-0.4
3,689,979	-	bcsB	b3532	0.72	-0.4
3,689,988	+	bcsB	b3532	0.73	-1.0
3,689,988	+	bcsB	b3532	0.73	-0.4
3,690,002	+	bcsB	b3532	0.73	-1.8
3,690,002	+	bcsB	b3532	0.73	-0.0
3,690,012	+	bcsB	b3532	0.74	-1.0
3,690,012	+	bcsB	b3532	0.74	-1.0
3,690,017	+				+0.6
3,690,017	+	bcsB	b3532	0.74	+0.6
3,690,023	+	bcsB	b3532	0.74	-1.0
3,690,035	+	bcsB	b3532	0.75	-0.4
3,690,035	+	bcsB	b3532	0.75	+1.1
3,690,059	-	bcsB	b3532	0.76	+2.1
3,690,059	-	bcsB	b3532	0.76	-0.7
3,690,098	-	bcsB	b3532	0.77	-0.4
3,690,120	-	bcsB	b3532	0.78	-0.4
3,690,236	+	bcsB	b3532	0.83	-0.2
3,690,252	+	bcsB	b3532	0.84	-0.7
3,690,265	+	bcsB	b3532	0.84	-0.8
3,690,283	-	bcsB	b3532	0.85	-0.4
3,690,283	-	bcsB	b3532	0.85	-0.2
3,690,314	-	bcsB	b3532	0.86	-0.6
3,690,361	+	bcsB	b3532	0.88	+0.6
3,690,361	+	bcsB	b3532	0.88	+0.9
3,690,361	+	bcsB	b3532	0.88	-0.4
3,690,369	-	bcsB	b3532	0.89	+0.6
3,690,369	-	bcsB	b3532	0.89	-0.2
3,690,379	-	bcsB	b3532	0.89	-0.8
3,690,408	+				+0.3
3,690,414	+				+2.1
3,690,450	-				-0.8
3,690,460	+				-0.9
3,690,468	-				-0.9
3,690,468	-				-0.4
3,690,516	+				+0.6
3,690,535	-				-1.0
3,690,535	-				-0.4
3,690,535	-				-0.4
3,690,572	+				+1.3
3,690,572	+				-1.2
3,690,577	-				-0.9
3,690,577	-				+0.6
3,690,590	+				+0.8
3,690,649	-				-0.9
3,690,649	-				+2.3
3,690,659	-				+1.3
3,690,665	-				-0.7
3,690,669	-				-0.4
3,690,711	-				-1.9
3,690,718	-				-1.8
3,690,718	-				+0.0
3,690,742	-				-0.4
3,690,773	-				+0.6
3,690,786	-				+0.1
3,690,793	+				+1.1
3,690,887	+				-0.2
3,690,891	+				+0.2
3,690,891	+				-0.1
3,690,891	+				+2.1
3,690,891	+				-1.4
3,690,897	-				-0.8
3,690,899	+				+0.4
3,690,899	-				+2.1
3,690,899	-				+0.6
3,690,932	-	yhjO	b3533	0.11	-0.6
3,691,038	+	yhjO	b3533	0.15	-0.7
3,691,101	+	yhjO	b3533	0.18	-0.5
3,691,109	-	yhjO	b3533	0.18	+0.8
3,691,109	-	yhjO	b3533	0.18	+0.6
3,691,109	-	yhjO	b3533	0.18	+0.9
3,691,112	+	yhjO	b3533	0.18	-2.2
3,691,112	+	yhjO	b3533	0.18	-0.3
3,691,121	-	yhjO	b3533	0.18	-1.4
3,691,190	+	yhjO	b3533	0.21	-0.8
3,691,244	-	yhjO	b3533	0.23	+0.1
3,691,245	+	yhjO	b3533	0.23	-0.4
3,691,245	+	yhjO	b3533	0.23	+0.6
3,691,251	-	yhjO	b3533	0.23	+0.6
3,691,251	-	yhjO	b3533	0.23	+1.1
3,691,324	-	yhjO	b3533	0.26	-1.2
3,691,341	+	yhjO	b3533	0.27	+1.6
3,691,341	+	yhjO	b3533	0.27	+0.6
3,691,361	-	yhjO	b3533	0.27	+0.9
3,691,361	-	yhjO	b3533	0.27	+0.3
3,691,455	+	yhjO	b3533	0.31	+1.3
3,691,455	+	yhjO	b3533	0.31	+1.3
3,691,455	+	yhjO	b3533	0.31	+0.6
3,691,466	+	yhjO	b3533	0.32	-1.2
3,691,468	-	yhjO	b3533	0.32	-0.4
3,691,500	+	yhjO	b3533	0.33	-2.0
3,691,559	-	yhjO	b3533	0.35	+0.4